PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022133668.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

FAR1

Protein Properties

Length: 807aa MW: 92057.7 Da PI: 5.8423

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022133668.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	80	4.4e-25	95	181	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY+eYA++vGF +++++s++sk++g++++ + Cs+ g+++e++++ ++r+ t+tgC+a++++kk++dgkw v+ + eHnHe++p XP_022133668.1 95 SFYREYARSVGFGITIKASRRSKKSGKFIDIKIACSRFGSKRESTTT----VNPRPCTKTGCNASMHIKKRQDGKWFVHGFIREHNHEICP 181 5**************************************998877....9**********************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 807 aa Download sequence
MDVDLELPSS DQERLDIIVG KNDGMDVDQT HSEGEDGNSP TRDEHSEEMS MPNTETSSGQ 60 DQMDIINVET DIISMGPTSE PKKGLEFESK EEAYSFYREY ARSVGFGITI KASRRSKKSG 120 KFIDIKIACS RFGSKRESTT TVNPRPCTKT GCNASMHIKK RQDGKWFVHG FIREHNHEIC 180 PDDFHYAFKG RNKKPSIVIS EKKGLQLALD EGDVQLMLEH FMHMQELNPN FFYALDFNQE 240 KQLRSVLWVD AKGRHEYKYF SDVILFDIHY ISNGYKIPFV PIVGVNHHFQ YILFGGALIG 300 DTDTSSFIWL MKTWLKAVGG SAPRVVLTDQ EQFLKEAVAD VFPNTLHFFS LWHMLRRVPG 360 KLGKIIDQND DFIESLNKCI YRSWTDEEFE TRWWEMIDKF ELREDVWLQL LFDDRKKWVP 420 TYVRNCFLGG MSTVGRPGSV TSSLDKYICK ETTFKEFIEH SEVFSKNMLE LEANADFETR 480 HQEPALKSLS PFEKQMATIY TTAIFKKFQL EVLGAASCQV QKQIEDGAIV TYQVYDLEDS 540 QDFLVAWNMT ELDICCLCHS FEYRGILCRH AILVLQVSGV TSFPRKYILK RWTRSAKIGP 600 SETSNQLHYR VQRFNNLCKQ AIKLGEQGSL SQETYDIASE ALEEVLKQCV FVNNSTKSSA 660 ETNTLVSVGF VDVEEDEHGK NMAKSSRKKK TSKKGKEVDS RAAALDGCHS CQENMLGSGL 720 SNSNSPFCDG PEGYYSHQAM QSLDQSPSVV AHVGLHSDGQ TMQSQGQLNL DVQRRLDIED 780 NRQDMEQPDD ALSQTHINNS SGRTRQP

Sequence ? help Back to Top

Protein Sequence Length: 807 aa Download sequence

MDVDLELPSS DQERLDIIVG KNDGMDVDQT HSEGEDGNSP TRDEHSEEMS MPNTETSSGQ  60
DQMDIINVET DIISMGPTSE PKKGLEFESK EEAYSFYREY ARSVGFGITI KASRRSKKSG  120
KFIDIKIACS RFGSKRESTT TVNPRPCTKT GCNASMHIKK RQDGKWFVHG FIREHNHEIC  180
PDDFHYAFKG RNKKPSIVIS EKKGLQLALD EGDVQLMLEH FMHMQELNPN FFYALDFNQE  240
KQLRSVLWVD AKGRHEYKYF SDVILFDIHY ISNGYKIPFV PIVGVNHHFQ YILFGGALIG  300
DTDTSSFIWL MKTWLKAVGG SAPRVVLTDQ EQFLKEAVAD VFPNTLHFFS LWHMLRRVPG  360
KLGKIIDQND DFIESLNKCI YRSWTDEEFE TRWWEMIDKF ELREDVWLQL LFDDRKKWVP  420
TYVRNCFLGG MSTVGRPGSV TSSLDKYICK ETTFKEFIEH SEVFSKNMLE LEANADFETR  480
HQEPALKSLS PFEKQMATIY TTAIFKKFQL EVLGAASCQV QKQIEDGAIV TYQVYDLEDS  540
QDFLVAWNMT ELDICCLCHS FEYRGILCRH AILVLQVSGV TSFPRKYILK RWTRSAKIGP  600
SETSNQLHYR VQRFNNLCKQ AIKLGEQGSL SQETYDIASE ALEEVLKQCV FVNNSTKSSA  660
ETNTLVSVGF VDVEEDEHGK NMAKSSRKKK TSKKGKEVDS RAAALDGCHS CQENMLGSGL  720
SNSNSPFCDG PEGYYSHQAM QSLDQSPSVV AHVGLHSDGQ TMQSQGQLNL DVQRRLDIED  780
NRQDMEQPDD ALSQTHINNS SGRTRQP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32250.2	0.0	FAR1 family protein