PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022133663.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family GRAS
Protein Properties Length: 674aa    MW: 74062.7 Da    PI: 5.2673
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022133663.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS445.63.4e-1363116731374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     lv+lLl+cAeav+++d  la+++L +l+  ++p gd+mqR+a++fteAL+arla + ++   + ++ +  ++ns e+l+++++ ++++P++kf+h
  XP_022133663.1 311 LVHLLLACAEAVAKEDYMLARRYLHHLNRVVTPIGDSMQRVASCFTEALSARLAATLTTSIITPNSAPPFPQNSLETLKIYQIVYQACPYVKFAH 405
                     68*****************************************************665555556666666799********************** PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     +taNqaI ea+e eervH+iD+di qG QWpa++qaLa+Rp+g+p lRiTgvg+      ++++etg+ L+++A++l+vpfef++ + ++le+l+
  XP_022133663.1 406 FTANQAIFEAFEAEERVHVIDLDILQGYQWPAFMQALAARPGGSPFLRITGVGP----AIDAVRETGRCLTELAHSLNVPFEFHA-IGEQLEALK 495
                     ******************************************************....99*************************.7******** PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikv 285
                     +++++ + gEalaVn v +lhr++    sl +    +L ++++  P++v++veqea+hn++ Fl rfleal+yysa+fdsl+a++p es +r+kv
  XP_022133663.1 496 PNMFNRRVGEALAVNAVNRLHRVP--GKSLGN----LLGMIRDQAPNIVTLVEQEASHNGPYFLGRFLEALHYYSAIFDSLDATFPVESPQRAKV 584
                     ***********************9..455555....*********************************************************** PP

            GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     E+ ++++ei+n+vacegaer+erhe+lekWr+ +e+ GFk vpls +a++q k ll  ++ dgyr+ e++g+l+lgW+dr+L+++SaWr
  XP_022133663.1 585 EQYIFAPEIRNIVACEGAERIERHERLEKWRKLMEAKGFKGVPLSGNAVTQSKILLGLYSCDGYRLTEDKGCLLLGWQDRALIAASAWR 673
                     ****************************************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 674 aa     Download sequence    
MINSLCGCIG SSKVESPSCA KLAQPTSPNE SVSAPMKTAS IPSSELEQST LTPPSLNFPA  60
PKFEIDGGGD IEIQSPDNSV WDSLFADQLD CDFMISSPVR SLPSPQSLSF NYYNYNYGQG  120
MQIQSLSGCS PPRSSSQVGA SSSRGKGMSP LHKVFNSPNN NQYMQSVDQA ISLPSIGELL  180
QDYQDDQGFE TYPNIAKIPG IGESLQYYDI STSLPPIFED LTMPNSSRLC GSNEESSTER  240
EFYNHLGSIN TTASLPHQDQ EQGNPSQHPP RPTPLPPLPP PKQPQNQLSH SLMAPLLVGS  300
SEQEQDSGLQ LVHLLLACAE AVAKEDYMLA RRYLHHLNRV VTPIGDSMQR VASCFTEALS  360
ARLAATLTTS IITPNSAPPF PQNSLETLKI YQIVYQACPY VKFAHFTANQ AIFEAFEAEE  420
RVHVIDLDIL QGYQWPAFMQ ALAARPGGSP FLRITGVGPA IDAVRETGRC LTELAHSLNV  480
PFEFHAIGEQ LEALKPNMFN RRVGEALAVN AVNRLHRVPG KSLGNLLGMI RDQAPNIVTL  540
VEQEASHNGP YFLGRFLEAL HYYSAIFDSL DATFPVESPQ RAKVEQYIFA PEIRNIVACE  600
GAERIERHER LEKWRKLMEA KGFKGVPLSG NAVTQSKILL GLYSCDGYRL TEDKGCLLLG  660
WQDRALIAAS AWRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.12e-98GRAS family protein