PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022133333.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

E2F/DP

Protein Properties

Length: 473aa MW: 52718.5 Da PI: 5.3675

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022133333.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	81	1e-25	146	211	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++l++++++gi++ln++a++L +v ++RRiYDi+NVLe+++liekk kn i wkg XP_022133333.1 146 RYDSSLGLLTKKFINLIKQARDGILDLNNAAETL---KV--QKRRIYDITNVLEGIGLIEKKLKNIIYWKG 211 6899****************************...88..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 473 aa Download sequence
MRGGSRAPHR SEPLPQSQTG QILPPLKRQL AFDSTKPPFV PPGDYYHFGG GSSNVHAHDQ 60 QPEAVLVKPL KLKQKGAMYH NMXESNDCIX DQGSSKDALS SIQTPVSAKG GRVYKSKASR 120 RTTSGPQTPI SDTSSFSSLT PAGSCRYDSS LGLLTKKFIN LIKQARDGIL DLNNAAETLK 180 VQKRRIYDIT NVLEGIGLIE KKLKNIIYWK GFNAQIPGNV DSDTSMLQVD VENLSFEERR 240 LDDKIRGLQE RLRNLSEDEN VQKWLYVTEE DIKNLPCFQN ETLIAIKAPH GTTLEVPDPD 300 EAVDYPQRRY RIVLRSTMGP IDVYLVSQFE EKFEEMNVVP PPSSFLHASS SGSNEHLATE 360 VIIGENSRKE TEPPAHLSQH SSSCDVNGSN EFPGGIMKII PSEVDNDADY WLLSDAEVSI 420 TDMWRTDSDI AWDQSDMVPH DFVISDVSAQ RSRPASPRPE SAEAPYDANL RQR

Sequence ? help Back to Top

Protein Sequence Length: 473 aa Download sequence

MRGGSRAPHR SEPLPQSQTG QILPPLKRQL AFDSTKPPFV PPGDYYHFGG GSSNVHAHDQ  60
QPEAVLVKPL KLKQKGAMYH NMXESNDCIX DQGSSKDALS SIQTPVSAKG GRVYKSKASR  120
RTTSGPQTPI SDTSSFSSLT PAGSCRYDSS LGLLTKKFIN LIKQARDGIL DLNNAAETLK  180
VQKRRIYDIT NVLEGIGLIE KKLKNIIYWK GFNAQIPGNV DSDTSMLQVD VENLSFEERR  240
LDDKIRGLQE RLRNLSEDEN VQKWLYVTEE DIKNLPCFQN ETLIAIKAPH GTTLEVPDPD  300
EAVDYPQRRY RIVLRSTMGP IDVYLVSQFE EKFEEMNVVP PPSSFLHASS SGSNEHLATE  360
VIIGENSRKE TEPPAHLSQH SSSCDVNGSN EFPGGIMKII PSEVDNDADY WLLSDAEVSI  420
TDMWRTDSDI AWDQSDMVPH DFVISDVSAQ RSRPASPRPE SAEAPYDANL RQR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	179	185	LKVQKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36010.1	1e-154	E2F/DP family protein