PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022133209.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | MYB_related | ||||||||
Protein Properties | Length: 245aa MW: 27434 Da PI: 8.9099 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 40.4 | 6.6e-13 | 127 | 172 | 2 | 47 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++WT+ E++l++ + k++G+g+W++I+r + Rt+ q+ s+ qky XP_022133209.1 127 KPWTKKEHQLFLLGLKKFGKGDWRSISRNVVISRTPTQVASHAQKY 172 58*****************************99************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MEGPPSPSFR VSDDYWSPKT APSSPAPWTR HQDKIFEHAL VMVPENSPNR WLRIAGLIPG 60 KSPAEVSYHY DALVSDLLDI DSGRVELPSY AEDDSVASLP ETEAPPPNLS EKPSKSRPNE 120 TERKKGKPWT KKEHQLFLLG LKKFGKGDWR SISRNVVISR TPTQVASHAQ KYFLRQESAK 180 KDRKRSSIHD ITTVEGSLVA AAATDHCQLS TVPTIIQPPP PWPLLPHQFA SASYFPPDHR 240 SLLDY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G04760.1 | 2e-57 | MYB family protein |