PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022133167.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

NAC

Protein Properties

Length: 272aa MW: 31135.9 Da PI: 6.5262

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022133167.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	138.7	3.5e-43	5	139	1	127
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk....leleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87 l+pGfrF Pt+eelv++yL++k+e+ + ++++i+ +diy+++Pw+Lp+ + +e++w+fF++ ++++a+g r++r t +gyWkatg XP_022133167.1 5 LTPGFRFYPTEEELVSFYLHNKLEDGRddlkQVMDQIIPVLDIYDFNPWNLPRfageVCGRDEEQWFFFVPMHESEARGGRAKRLTITGYWKATG 99 579********************9966643344569999*******546654444778*************************** PP NAM 88 kdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127 + +v+s++++ +g+k+t+vfy+grap+g+kt+W m+ey+ XP_022133167.1 100 SPSQVYSSNHRSIGVKRTMVFYNGRAPTGTKTQWKMNEYK 139 *************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 272 aa Download sequence
MEDYLTPGFR FYPTEEELVS FYLHNKLEDG RDDLKQVMDQ IIPVLDIYDF NPWNLPRFAG 60 EVCGRDEEQW FFFVPMHESE ARGGRAKRLT ITGYWKATGS PSQVYSSNHR SIGVKRTMVF 120 YNGRAPTGTK TQWKMNEYKA IHVAADPSSS SSATAVFQLR QEFSLCRIYK RSKTLRSFDR 180 RPQAQGVETM ARSIASNVQV AMTKSLCFTN QPNPTTGADL LTAVISSPNN SSSGDQRDES 240 SRTTAEISNQ VDVRIMEAAY EPMWDWEQLN WF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22380.1	2e-78	NAC family protein