PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022132867.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family bHLH
Protein Properties Length: 332aa    MW: 37142.8 Da    PI: 4.7684
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022132867.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.71.5e-11164207654
                     HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                      ++ErrRR+r+N++++ Lr ++Pk +      K++  +iL  +++Y+k+L
  XP_022132867.1 164 LMAERRRRKRLNDRLSMLRAIVPKiS------KMDRTSILGDTIDYVKEL 207
                     589*********************66......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MELSQHGFLE ELLASTPWTS HSNGFNDFFQ NGWNFNSSFD ENPAMGTPNF PHFPGIQTTP  60
NDFPFGDQLL YTNFLEGFAM PELDSSSYTK NNETPPFVSQ EEIMSNKTPP AAVEEEEVGF  120
LESKVEMEQM VGPEAPAFKM GVPELGKRSS NKAKKIEGQP SKNLMAERRR RKRLNDRLSM  180
LRAIVPKISK MDRTSILGDT IDYVKELLER INNLKEEEEV GVDSNHRSLN GISKEPKPSE  240
VLVRNSPKFD VEKRERETRI DICCATRPGL LLSTVNTLEA LGLEIHQCVI SCFNDFSMQA  300
SCSEGSAQKA VASSEDVKEA LFRNAGYGGN CL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1167174ERRRRKRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.15e-86bHLH family protein