PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022132796.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

FAR1

Protein Properties

Length: 692aa MW: 80093.1 Da PI: 6.5455

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022132796.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	67	4.9e-21	68	159	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 ++Y ++A++ GFs+rk++s+ s + g ++kr+fvC+++g++ +kk +++r r++ r+gC+ak+ ++ke ++w v ++++ HnHel XP_022132796.1 68 EYYGNFARKNGFSIRKERSRLSPQLG-VYKRDFVCYRSGFAPAKKKPIGEHHRDRKSVRCGCDAKMYLSKEVsegVAQWFVVQFSNVHNHELL 159 59******************8888.***************************************98766789***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 692 aa Download sequence
MTSIPSKNVW IRRQQCPCGD WKCYISYEGE GEETSVAAQL VTSERVCSEA MVAPYVGMVF 60 KSDNDAFEYY GNFARKNGFS IRKERSRLSP QLGVYKRDFV CYRSGFAPAK KKPIGEHHRD 120 RKSVRCGCDA KMYLSKEVSE GVAQWFVVQF SNVHNHELLE DDQVRLLPAY RKIHEADQER 180 ILLLSKAGFP IHRIVKVLEL EKGIHGGQLP FLERDVRNFV QNRKKIVQEH DALLNEKREI 240 DTMELLEACK ATKESDEEFV YDFTVDANDK VEHVAWSYGD SVNTYDMFGD VVYFDTTYSS 300 ITYGLLLGMW LGIDNHGRTI FFGCVLLQDE TPRSFAWALQ TFIRFMRGRF PQTILTDLDP 360 GLRDAIRSEL PGTKHIVSRW NILSKVSSWF SLHLGSRYAE FKSEFDMLYS VENTEDFEIR 420 WDQMVSMFGL VSDKHIDLLF TFREYWVPSF IRGCLLARMA TSAYFKSIGT FLKGVFNAQT 480 CLRSFFEQVG ISANFQSHEH QGMQYLQVKT NIPIEEHARS ILTPFAFNTL QHELVLAMQY 540 AASEMSDGSY LVRHFKKMDG ERLVMWIADG EQIHCSCKEF ESSGLLCRHA LRIFIIKNYF 600 QLPDKYYLGR WRQESSLGLS DGHGIQSNNG DWFHEYQRLT EALFAESSIT KERCEHVRSE 660 LMKEITRILN EIRRMPENDG TAAMDLTDSP NG

Sequence ? help Back to Top

Protein Sequence Length: 692 aa Download sequence

MTSIPSKNVW IRRQQCPCGD WKCYISYEGE GEETSVAAQL VTSERVCSEA MVAPYVGMVF  60
KSDNDAFEYY GNFARKNGFS IRKERSRLSP QLGVYKRDFV CYRSGFAPAK KKPIGEHHRD  120
RKSVRCGCDA KMYLSKEVSE GVAQWFVVQF SNVHNHELLE DDQVRLLPAY RKIHEADQER  180
ILLLSKAGFP IHRIVKVLEL EKGIHGGQLP FLERDVRNFV QNRKKIVQEH DALLNEKREI  240
DTMELLEACK ATKESDEEFV YDFTVDANDK VEHVAWSYGD SVNTYDMFGD VVYFDTTYSS  300
ITYGLLLGMW LGIDNHGRTI FFGCVLLQDE TPRSFAWALQ TFIRFMRGRF PQTILTDLDP  360
GLRDAIRSEL PGTKHIVSRW NILSKVSSWF SLHLGSRYAE FKSEFDMLYS VENTEDFEIR  420
WDQMVSMFGL VSDKHIDLLF TFREYWVPSF IRGCLLARMA TSAYFKSIGT FLKGVFNAQT  480
CLRSFFEQVG ISANFQSHEH QGMQYLQVKT NIPIEEHARS ILTPFAFNTL QHELVLAMQY  540
AASEMSDGSY LVRHFKKMDG ERLVMWIADG EQIHCSCKEF ESSGLLCRHA LRIFIIKNYF  600
QLPDKYYLGR WRQESSLGLS DGHGIQSNNG DWFHEYQRLT EALFAESSIT KERCEHVRSE  660
LMKEITRILN EIRRMPENDG TAAMDLTDSP NG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28530.1	0.0	FAR1 family protein