PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022132733.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family B3
Protein Properties Length: 290aa    MW: 32832.7 Da    PI: 9.9146
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022132733.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B363.43.5e-2013103199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     ffkv++p++++++  +++p  f+e+++g+ ++    +l+d sg+sW+v+l  +  ++++++++GW+eF++ + Lk gDf+vF++dg++ f   vk
  XP_022132733.1  13 FFKVFLPNSSSQH--MCIPPAFVEHFNGSVPS--NAVLRDHSGKSWDVTL--EELKNGVFFKNGWREFADYHLLKYGDFLVFQYDGSHMF--DVK 99 
                     8999966555555..8*******888655444..59**************..********************************998777..899 PP

                     EE-S CS
              B3  96 vfrk 99 
                     +f k
  XP_022132733.1 100 IFGK 103
                     9876 PP
2B343.46.1e-142012811898
                     --HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-..SS.SEE..EEEEE- CS
              B3  18 lpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkld..gr.sefelvvkvfr 98 
                     ++kk + ++++    + t++l +e g+sW v+   +  s+r + lt+GW+ F k+n+Lk +D ++F+++  ++  ++e  vk+ r
  XP_022132733.1 201 ISKKMVVANNIL--LKPTVVLINEMGKSWPVTA--KPLSRRrFGLTTGWSVFFKENRLKMNDKCTFEFVrgRNnICGEIIVKITR 281
                     666666666332..3338***************..6665555*************************773233456666666666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MEPSSRISSC PEFFKVFLPN SSSQHMCIPP AFVEHFNGSV PSNAVLRDHS GKSWDVTLEE  60
LKNGVFFKNG WREFADYHLL KYGDFLVFQY DGSHMFDVKI FGKNGCKKEL VSGNGSCFPD  120
VKIKDEPQSE QDCSSKSLTG CERNGLEVRS SGSSGTAPKS REISTTNLEE LCPSKTTDHI  180
SKKRPTFKHV VKRWTCSAIQ ISKKMVVANN ILLKPTVVLI NEMGKSWPVT AKPLSRRRFG  240
LTTGWSVFFK ENRLKMNDKC TFEFVRGRNN ICGEIIVKIT RRQARARCEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.14e-34B3 family protein