PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022132561.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

bHLH

Protein Properties

Length: 335aa MW: 36740.3 Da PI: 5.94

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022132561.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	44.3	3.2e-14	159	205	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h +Er+RR+++ ++f L l+P++ kK++Ka+iL A+ YIk+Lq XP_022132561.1 159 DHVLAERKRREKLSQRFVALSALIPHL-----KKMDKASILGDAITYIKDLQ 205 58899********************.....9****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 335 aa Download sequence
MEISSAKWLS EMELESAFMD DFQMNPFECT LEELSFQTFS DESYTSHADL DNSSVKTPPA 60 KQPKTAANNR QIASMAASSS SSHIISFGNS HSAKVNDNGV NYSNVKPKFE MGCEGNIDLS 120 SVIAQGGSNE NQNYCSQKYG QGIKRGAGCL NRSPLVAQDH VLAERKRREK LSQRFVALSA 180 LIPHLKKMDK ASILGDAITY IKDLQERLRV ADEQLAAKAT VESVVFANRS SDDLSSGGSD 240 VSSDENSSPD RAIPDIEARV SGKDVLLRIH GKRCKGCLSN ILKEIEKLNL TVLNSSALPF 300 GHSRLDITII AQMEDDFSMT VKELVQKLRQ ASLEL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	164	169	ERKRRE
2	165	170	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22760.1	5e-50	bHLH family protein