PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022132497.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family bHLH
Protein Properties Length: 379aa    MW: 42119.8 Da    PI: 5.0303
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022132497.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH49.67.1e-16165211455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      hn  E+rRR+riN+++  L+ l+P++      K +Ka++L +A+eY+k+Lq
  XP_022132497.1 165 VHNLSEKRRRSRINEKMKALQNLIPNS-----NKTDKASMLDEAIEYLKQLQ 211
                     6*************************7.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 379 aa     Download sequence    
MEDSSSNSDK CYQNACSTWT LPVPVPAAVS SSPSPPDEFS LFLQQILLRS SSATPHSSPS  60
IFSNLSCNIH PSHASSVLRL PDDIFAVHSS QLLNSSSSAL LHDPSPSCPT PTAPNASSTS  120
LGASDQNEND DFDCESEEGL EAFVEEMPTK RNPRSSSKRS RAAEVHNLSE KRRRSRINEK  180
MKALQNLIPN SNKTDKASML DEAIEYLKQL QLQVQMLSMR HGLSLHPMNL AGSLQYLQLS  240
HMRMDFGEEN KSLPSDQERP NHIFLSLPDK RAASVHPFMP DIGRETPFEL EPSIQAHLIP  300
FYLSESSKEI CRDVPQDHQV NVSQSETTPF VSRPYNIPEP DLQELQNSVS VEHCIIEGNQ  360
SASTQEDQLK QHSCIDKDC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36930.12e-47bHLH family protein