PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022132297.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family bHLH
Protein Properties Length: 295aa    MW: 32101.6 Da    PI: 5.3891
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022132297.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.86.3e-112192591055
                     HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     r+RR+riN+++  L++l+P+      +K++ +++Le+Av+Y+k Lq
  XP_022132297.1 219 RKRRERINERLKILQKLVPNG-----TKVDISTMLEEAVHYVKFLQ 259
                     9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MAEHQYDNYN NAAAAYSNSS SWFYSLDAFD PNFQTDMSLS LSCSSCSTDN SSGNASFLFP  60
NSLTTHDLFM SIDDDTNFGS SFLSDVLMGE LKVDKADLAA ACDGLLQIPP PPENEPIALK  120
RKVNSGDFSN DQKVTKKTRI SGHGQKRKKT HKAKGVSVEE EDNAAAAEAE GQSSVSYSSE  180
EENGSQGGGG ATTSDGGVSG KTTRASRGSA TDPQSLYARK RRERINERLK ILQKLVPNGT  240
KVDISTMLEE AVHYVKFLQL QIKLLSSDEM WMFAPLAYNG MDLGLHQKLS PFLSH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1146151KRKKTH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.13e-50bHLH family protein