PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022132284.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

TALE

Protein Properties

Length: 470aa MW: 51973.4 Da PI: 5.8736

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022132284.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	22.7	1.6e-07	406	439	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp+++++++L +++gL+ +q+ +WF N+R + XP_022132284.1 406 KWPYPTEDDKAKLVQETGLQLKQINNWFINQRKR 439 469*****************************87 PP
2	ELK	28.7	2.9e-10	360	381	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+++Y+++++++++E++ XP_022132284.1 360 ELKHELKNGYKEKIVDIREEIL 381 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 470 aa Download sequence
MAFRNQLSRD LPLHYGNQPQ PQQQPDRPLS DNTLRSILPD QLTDHSPPGA ASKTEHPLQS 60 TPNWLNSALL RSQTPHSHYS GETPTTAPDN VNTDFLNLHT TASNSAVSHP SGQWLSRPIL 120 HRNHSDVMDE VADAADAMIG VTTTLSRESD DLKNNSSGGG VEGVNNSEDV AVESDGNEGA 180 TGGEAVVNWQ NARSKAEILA HPLYEQLLSA HVACLRIATP VDQLPRIDSQ LAQSQNVAAK 240 YSSLGHGSQP IVGNGKELDQ FMTHYVLLLC SFKEQLQQHV RVHAMEAVYA CWEIEQSLQS 300 LTGVSPGEGT GATMSDDDED QIDSDASLFD GSFEGNDAMG FGPLIPTESE RSLMERVRHE 360 LKHELKNGYK EKIVDIREEI LRKRRAGKLP GDTTSVLKAW WQSHSKWPYP TEDDKAKLVQ 420 ETGLQLKQIN NWFINQRKRN WHTNPSTSTT LKSKRKRSNA GETTGNEHLP

Sequence ? help Back to Top

Protein Sequence Length: 470 aa Download sequence

MAFRNQLSRD LPLHYGNQPQ PQQQPDRPLS DNTLRSILPD QLTDHSPPGA ASKTEHPLQS  60
TPNWLNSALL RSQTPHSHYS GETPTTAPDN VNTDFLNLHT TASNSAVSHP SGQWLSRPIL  120
HRNHSDVMDE VADAADAMIG VTTTLSRESD DLKNNSSGGG VEGVNNSEDV AVESDGNEGA  180
TGGEAVVNWQ NARSKAEILA HPLYEQLLSA HVACLRIATP VDQLPRIDSQ LAQSQNVAAK  240
YSSLGHGSQP IVGNGKELDQ FMTHYVLLLC SFKEQLQQHV RVHAMEAVYA CWEIEQSLQS  300
LTGVSPGEGT GATMSDDDED QIDSDASLFD GSFEGNDAMG FGPLIPTESE RSLMERVRHE  360
LKHELKNGYK EKIVDIREEI LRKRRAGKLP GDTTSVLKAW WQSHSKWPYP TEDDKAKLVQ  420
ETGLQLKQIN NWFINQRKRN WHTNPSTSTT LKSKRKRSNA GETTGNEHLP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	437	457	RKRNWHTNPSTSTTLKSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25220.1	1e-176	TALE family protein