PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022132127.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family GATA
Protein Properties Length: 297aa    MW: 32062.5 Da    PI: 7.0519
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022132127.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA51.51.4e-16207243135
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C+nCg ++  Tp++Rrgp+g+++LCnaCGl+++ +g+
  XP_022132127.1 207 CTNCGISSmaTPMMRRGPSGPRSLCNACGLFWANRGT 243
                     *********************************9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MYGRAQPLTM ADQIASGPDC GDSGDHLDNR LVRYGAHSLD DGAGGVGGII EDLNPDAVYA  60
SAGDGSDMAV QRSDGSSQLT LSFRGQVYLF DAVSPEKVQA VLLLLGGCEL SSGQQGVDFV  120
NQNQRNAVDF PGRVSQPQRA ASLNRFRQKR KERCFDKKVR YSVRQEVALR MQRNKGQFTS  180
SKKPDGSYSL GSVSESGQDE NPPETTCTNC GISSMATPMM RRGPSGPRSL CNACGLFWAN  240
RGTLRDLSKR NPDHPVTPAE QCESDAAKEL DCRRGTHPHS NLASFSNGDN SALMAEH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24470.29e-84GATA family protein