PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022131988.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family C3H
Protein Properties Length: 298aa    MW: 33328.7 Da    PI: 8.0523
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022131988.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH24.64.3e-08115136426
                     ---SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   4 elCrffartGtCkyGdrCkFaHg 26 
                     ++C++ ++ G+Ck Gd+C FaHg
  XP_022131988.1 115 AECPDLRQ-GFCKKGDTCEFAHG 136
                     78999999.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MIAESMLLNP TAQILPWDSL EDPAAYFASN PYASNSNAAG HAPSPDSPAE FEFFSDEDSP  60
VAVADAFSCD HFRMFDFKVR TCARGRSHDW TKCPYAHPGE KARRRDPRKF RYSGAECPDL  120
RQGFCKKGDT CEFAHGVFES WLHPDRYRTQ ACRDGMACRR RVCFFAHSSE QLRIPSKQSI  180
RSPLARGKGI AAISSPTSIL ISPTESPPMS PTTGGESLRR LAALMQNLQV DDLKLSPPAA  240
GLGCPRVSCL RWERSYEEEP AMERVESGRN LRTLMYAKLM RENSVEQLRP LISAASWS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G19810.13e-76C3H family protein