PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022131842.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family GATA
Protein Properties Length: 350aa    MW: 38267.6 Da    PI: 4.7137
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022131842.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA49.84.8e-16202238135
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++Cg+++  Tp +Rrgp g++tLCnaCGl+++ kg+
  XP_022131842.1 202 CQHCGVSEnnTPAMRRGPAGPRTLCNACGLMWANKGT 238
                     *******99*************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    
MAAANPQPLQ ARPFQDHVQV PTMMGDDDVE YEDGGGGGGD VMDDVEEAHM ASVSVANLGG  60
VVMASRTSEL TLSFEGEVYV FPAVTPEKVQ AVLLLLGGRD VPTGVPTMEV PYDHNNRGMV  120
DTPKRSNLSR RIASLVRFRE KRKERCFDKK IRYTVRKEVA QRMHRKNGQF ASLKESSGAS  180
SWESAHSCLQ DGTRSETVLR KCQHCGVSEN NTPAMRRGPA GPRTLCNACG LMWANKGTLR  240
DLSKGGRNTS LDHMEPETPM DIKPTIMEGE FSGIQDEHGT PEDPGKTMTE GSSNPSIDPD  300
EEDLNQTTGD LTNSLPIRIV NHSANSDEQE PLVELANPSD TDLDIPTNFD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1121126DTPKRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.22e-67GATA family protein