PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022131787.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

CPP

Protein Properties

Length: 781aa MW: 86384.4 Da PI: 5.058

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022131787.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	52.4	1e-16	422	462	2	42
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 ++k+CnCkkskClk+YC+Cfaag +C e+C+Ce+C+N+ e+ XP_022131787.1 422 DSKRCNCKKSKCLKLYCDCFAAGIYCPESCSCEGCFNNPEN 462 689**********************************9875 PP
2	TCR	48.4	1.9e-15	508	547	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++kkgC+Ckks Clk+YCeC++a++ C+ +C+CedC+N + XP_022131787.1 508 RHKKGCSCKKSMCLKQYCECYQANVGCTIRCRCEDCRNIH 547 589***********************************65 PP

Sequence ? help Back to Top
Protein Sequence Length: 781 aa Download sequence
MDSPKTTQLT STLTNLSAIA TIAISPSDSP PDSFSDFVDH LFPIEPSKCD SEVQGLDSFV 60 FSSPHLNVNV ESSLLKRTRS SNTELAAESQ EANNKISEQT ELCPFDNFLA DFEEVAGSSI 120 IQVLCEKAEQ NFEENFAPEV CRPLEIENEQ SSIAFYCTES DLSTSQAFRK QENEDLCAQM 180 QDTCTIYQDG LDFMPQYLQE RLSNANLHGA YECDTQETLD GAFQPLSISQ PQSSMCQRYL 240 QSKEATANAT QKNLLSSNFT SNVKATSQHP SSVEDIELSV SNLDSALNTR VPAKSLHSLH 300 TLPHPDSGGN PPLGISRPSG IGLHLNSVIS VAMKNHGLKN DTTCSRDVSS STEDMEGHES 360 KSISSTSSIT LQSCHAVKFE NFETPCETRN FDYDPSFNLE KINNLPHKRK RKKSSVSSSG 420 DDSKRCNCKK SKCLKLYCDC FAAGIYCPES CSCEGCFNNP ENEQTVVEIR HQIESRDPLA 480 FAPKVIEDSN ELTVNNENGR PLNPSLARHK KGCSCKKSMC LKQYCECYQA NVGCTIRCRC 540 EDCRNIHGKK EEPCATPPEV ACDRADVGIS EAKLINDRDT AAFRKDISHS EFYDQQHNLA 600 SQTPFQYLEC LPSPEFDATS SSSPSCTDLF VETKTNIFDV GSYQWQHMNC DNGGASSTSS 660 IQSKPRGWIN VSRIGQLGTR GSSMSWLSSP DTLSIQASET PIKYINENSP KNQTLSLHRG 720 SENEVGKENS SSWLKGRRYI LKSMPHSPPL TAHNKYRATD NSSGSDCNDI NSKVIKXECP 780 W

Sequence ? help Back to Top

Protein Sequence Length: 781 aa Download sequence

MDSPKTTQLT STLTNLSAIA TIAISPSDSP PDSFSDFVDH LFPIEPSKCD SEVQGLDSFV  60
FSSPHLNVNV ESSLLKRTRS SNTELAAESQ EANNKISEQT ELCPFDNFLA DFEEVAGSSI  120
IQVLCEKAEQ NFEENFAPEV CRPLEIENEQ SSIAFYCTES DLSTSQAFRK QENEDLCAQM  180
QDTCTIYQDG LDFMPQYLQE RLSNANLHGA YECDTQETLD GAFQPLSISQ PQSSMCQRYL  240
QSKEATANAT QKNLLSSNFT SNVKATSQHP SSVEDIELSV SNLDSALNTR VPAKSLHSLH  300
TLPHPDSGGN PPLGISRPSG IGLHLNSVIS VAMKNHGLKN DTTCSRDVSS STEDMEGHES  360
KSISSTSSIT LQSCHAVKFE NFETPCETRN FDYDPSFNLE KINNLPHKRK RKKSSVSSSG  420
DDSKRCNCKK SKCLKLYCDC FAAGIYCPES CSCEGCFNNP ENEQTVVEIR HQIESRDPLA  480
FAPKVIEDSN ELTVNNENGR PLNPSLARHK KGCSCKKSMC LKQYCECYQA NVGCTIRCRC  540
EDCRNIHGKK EEPCATPPEV ACDRADVGIS EAKLINDRDT AAFRKDISHS EFYDQQHNLA  600
SQTPFQYLEC LPSPEFDATS SSSPSCTDLF VETKTNIFDV GSYQWQHMNC DNGGASSTSS  660
IQSKPRGWIN VSRIGQLGTR GSSMSWLSSP DTLSIQASET PIKYINENSP KNQTLSLHRG  720
SENEVGKENS SSWLKGRRYI LKSMPHSPPL TAHNKYRATD NSSGSDCNDI NSKVIKXECP  780
W

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	409	413	RKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22780.1	8e-49	CPP family protein