PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022131744.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB

Protein Properties

Length: 1006aa MW: 111995 Da PI: 5.2237

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022131744.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57	4.3e-18	38	84	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEde+l +av+ + g++Wk+Ia+++ Rt+ qc +rwqk+l XP_022131744.1 38 KGQWTAEEDEILRKAVQSFKGKNWKKIAECFK-DRTDVQCLHRWQKVL 84 799**************************9.**********986 PP
2	Myb_DNA-binding	63.2	5.2e-20	90	136	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEde++v+ vk++G++ W+tIa++++ gR +kqc++rw+++l XP_022131744.1 90 KGPWSKEEDEIIVESVKKYGPKKWSTIAQHLP-GRIGKQCRERWHNHL 136 79****************************.***********97 PP
3	Myb_DNA-binding	48.6	1.8e-15	142	184	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 + +WT+eE++ l++a++ +G++ W+ + ++ gRt++ +k++w+ XP_022131744.1 142 KEAWTQEEELALIRAHQIYGNR-WAELTKFLP-GRTDNAIKNHWN 184 579*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 1006 aa Download sequence
MEGDPALCTP LDVPGDSGQN IRALHSRRTS GPTRRSTKGQ WTAEEDEILR KAVQSFKGKN 60 WKKIAECFKD RTDVQCLHRW QKVLNPELVK GPWSKEEDEI IVESVKKYGP KKWSTIAQHL 120 PGRIGKQCRE RWHNHLNPAI NKEAWTQEEE LALIRAHQIY GNRWAELTKF LPGRTDNAIK 180 NHWNSSVKKK LDSYLASGLL EQYQPLHHAV QSSLPMLSSS RLQSSIDDSS LKGTETEDIS 240 EVSQNSAMVA CSNAVTRTKE ECQFAEDAFL KEEPISTPRC PEQYHTSLDD VTFLIPEMLC 300 ELGCYVKPPD QNFSQDCKTS ATGDNQYNLY EIPNISSLEL GHQELSQFQA IGSQEVENVS 360 HQASVGFSAS AVENMARASD KAEHMLISDY ECCRVLFSDA INNESFPSEN TRDGTDMVDV 420 SGYARPLHCQ SSNIEISETD RNLSLQLYHH SRSGVLDNSC SQPFLAPLLV SANDDTYVYT 480 SEASHIFETL EQELVANGRD GFIYSNESAG TPPKDGLKST EVQKQNSKDP SNLVPVNTFC 540 ERENTHSDQQ DLGALCYEPP RFPSLDVPFL SCDLAPSASE MQQEYSPLGI RQLMMSSMNC 600 LTPYRLWNSP SRDDSPDAVL KSAAKTFTNT PSILKKRHRE FFSPLSEKRS DKKQEIDVGI 660 SRTSQSNPSH QTINSRNTED KENINPSGEV RQEKPSNGLP EKISDSCSFQ ENIKQEVDNA 720 VTTEGLESVG QIVQQPSRVL AECYLNDSLL YSTNHNGVKG DEDRNSSAGI TEIQCRASTT 780 SQDQDFPSKL SSDNQFAVAK CPVASGTSHE SHPPTATCLN SEYTTAPPEV MGDNATKESS 840 IETVTIFGGT PFKRSIESPS AWKSPWFINS FLFGPRMDTD LPMEDVGYFM SPADRSYDAI 900 GLMKQVGEHT AAACANAQEV LGNETPQSLL KGRRGKFENQ YNEKKKNHVT NSQQRVRSTS 960 APDILTERRT LDFSECGTPG KGTENRKSST ALSFSSPSSY LLKGCR

Sequence ? help Back to Top

Protein Sequence Length: 1006 aa Download sequence

MEGDPALCTP LDVPGDSGQN IRALHSRRTS GPTRRSTKGQ WTAEEDEILR KAVQSFKGKN  60
WKKIAECFKD RTDVQCLHRW QKVLNPELVK GPWSKEEDEI IVESVKKYGP KKWSTIAQHL  120
PGRIGKQCRE RWHNHLNPAI NKEAWTQEEE LALIRAHQIY GNRWAELTKF LPGRTDNAIK  180
NHWNSSVKKK LDSYLASGLL EQYQPLHHAV QSSLPMLSSS RLQSSIDDSS LKGTETEDIS  240
EVSQNSAMVA CSNAVTRTKE ECQFAEDAFL KEEPISTPRC PEQYHTSLDD VTFLIPEMLC  300
ELGCYVKPPD QNFSQDCKTS ATGDNQYNLY EIPNISSLEL GHQELSQFQA IGSQEVENVS  360
HQASVGFSAS AVENMARASD KAEHMLISDY ECCRVLFSDA INNESFPSEN TRDGTDMVDV  420
SGYARPLHCQ SSNIEISETD RNLSLQLYHH SRSGVLDNSC SQPFLAPLLV SANDDTYVYT  480
SEASHIFETL EQELVANGRD GFIYSNESAG TPPKDGLKST EVQKQNSKDP SNLVPVNTFC  540
ERENTHSDQQ DLGALCYEPP RFPSLDVPFL SCDLAPSASE MQQEYSPLGI RQLMMSSMNC  600
LTPYRLWNSP SRDDSPDAVL KSAAKTFTNT PSILKKRHRE FFSPLSEKRS DKKQEIDVGI  660
SRTSQSNPSH QTINSRNTED KENINPSGEV RQEKPSNGLP EKISDSCSFQ ENIKQEVDNA  720
VTTEGLESVG QIVQQPSRVL AECYLNDSLL YSTNHNGVKG DEDRNSSAGI TEIQCRASTT  780
SQDQDFPSKL SSDNQFAVAK CPVASGTSHE SHPPTATCLN SEYTTAPPEV MGDNATKESS  840
IETVTIFGGT PFKRSIESPS AWKSPWFINS FLFGPRMDTD LPMEDVGYFM SPADRSYDAI  900
GLMKQVGEHT AAACANAQEV LGNETPQSLL KGRRGKFENQ YNEKKKNHVT NSQQRVRSTS  960
APDILTERRT LDFSECGTPG KGTENRKSST ALSFSSPSSY LLKGCR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32730.2	0.0	MYB family protein