PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022131429.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | MYB_related | ||||||||
Protein Properties | Length: 214aa MW: 23812.1 Da PI: 10.7839 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 42.9 | 1.1e-13 | 31 | 75 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +W++eE+ ++ + ++lG+g+W+ I+r++ ++Rt+ q+ s+ qky XP_022131429.1 31 PWSEEEHRVFLVGLEKLGKGDWRGISRKFVTTRTPTQVASHAQKY 75 8*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 214 aa Download sequence |
MASSPKPTRE KREGDPPFFL CHHFSLSLGV PWSEEEHRVF LVGLEKLGKG DWRGISRKFV 60 TTRTPTQVAS HAQKYFLRLT TLTRKKHCRP SLFDGGARDK FTMQVVESSN SNSKPTSNLP 120 ASPSNISFGI PSKNSTPINI PKMTLNHHHH HHNSSVPIWF GYEPSKNSSS IVNYHSHGKK 180 KTISHHQAPD LQLSLSTPKP VQLPAAINGA ISVT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G56840.1 | 1e-30 | MYB_related family protein |