PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022131414.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | ARR-B | ||||||||
Protein Properties | Length: 580aa MW: 65977.5 Da PI: 5.4288 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 77 | 2.4e-24 | 197 | 250 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++W+ +LH++Fv+av+q+ G +k Pk+il+lm+v+ Lt+e+v+SHLQkYRl XP_022131414.1 197 KARVVWSVDLHQKFVKAVNQI-GFDKVGPKKILDLMNVPWLTRENVASHLQKYRL 250 68*******************.9*******************************8 PP | |||||||
2 | Myb_DNA-binding | 38.5 | 2.7e-12 | 199 | 249 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ ++++++v+av+q G + +k+I m+ +t++++ s++qky+ XP_022131414.1 199 RVVWSVDLHQKFVKAVNQIGFDkvGPKKILDLMNvPWLTRENVASHLQKYR 249 678***********************************************7 PP | |||||||
3 | Response_reg | 83.3 | 7.4e-28 | 19 | 127 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+p+ +++l+++l+k y ev+++ ++eal+ll+e++ +D+++ D++mp+mdG++ll++ e +lp+i+++ ge + + + ++ G XP_022131414.1 19 VLVVDDDPTWLKILEKMLKKCSY-EVTTCCLAREALNLLRERKdgYDIVISDVNMPDMDGFKLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQHG 111 89*********************.***************999999**********************6644.8********************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l Kp+ ++el++ XP_022131414.1 112 ACDYLLKPIRMKELRN 127 *************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 580 aa Download sequence |
MENGFSSPRC DAFPVGLRVL VVDDDPTWLK ILEKMLKKCS YEVTTCCLAR EALNLLRERK 60 DGYDIVISDV NMPDMDGFKL LEHVGLEMDL PVIMMSVDGE TSRVMKGVQH GACDYLLKPI 120 RMKELRNIWQ HVLRKKIQEG RDIEGHDIIE GIHILRNGSD RYDDSQFLRG EELFSVRKRK 180 DVDKHDDKDF GDTSTKKARV VWSVDLHQKF VKAVNQIGFD KVGPKKILDL MNVPWLTREN 240 VASHLQKYRL YLSRLQKEND PKACFVVGMK HTDSSSKDGD GNFGLRSSLV VQQNDVTNSS 300 FSFSGDNFLL QNVDSIGCEV DRKRIVQEHT SEPKRPAARS VPEPIKTRST QMKFNNSFES 360 EGKFAAFDPN NRTCYPWVEA PEIQFKQESK PLVHLERDFS QFPPKVSPHQ VQIDQLQSIS 420 SISSGRSATE KDIASSIESK PPYSEDCSQQ IIHINLPKTS TDSFSGKSKS FNGMNDQFKP 480 ISTTTTPLGM TDQNFNLSCN SDLGSGLPKT TFDEDLQIYL LQDVCYPKNL EDQIIEFPDY 540 GDPGIFTDVP PHLYDALRYG YEYSYDPTEY PVIDEGLFIA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G67710.1 | 1e-124 | ARR-B family protein |