PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022131346.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

TALE

Protein Properties

Length: 498aa MW: 55832.5 Da PI: 6.4357

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022131346.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	25.9	1.6e-08	420	458	18	54
HHHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 18 lFek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +F++ ++yp+ +e+ LA k gLt +qV++WF N R + XP_022131346.1 420 MFQNflHPYPKDTEKHLLAVKSGLTRNQVSNWFINARVR 458 5887779******************************88 PP
2	BELL	60.1	5.1e-20	296	359	6	70
BELL 6 qkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiae 70 +k+++Ll+ll+ +d+rY q+ ++++tv+s+F+a+++l++ +++t+ l+ i+ +r+L+++i++ XP_022131346.1 296 DAKRSHLLTLLQLIDERYTQCLDEIHTVASAFHAATDLDP-RLHTRYTLQSITSVYRNLREKITN 359 579***********************************.********************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 498 aa Download sequence
MPTALQQIVV GDASQGCLSS SGNTEFQDQL AGTIPITSLF QSTSLSPVNV IRGNTKDSAF 60 SDSQFQPLET FRTCILHSSS NASNSSFATS SLNCEGDESL CNANNKWESH RFHYIQQHTG 120 ENQERLDFQT ISSIENLDLN GWMPSNTMNS KLWNELSLSL ATSQPVVIEG TNCLDQYPQL 180 AFSGATQACL NSTELGSNLN SCNSMDLSLS YGSGSPIHLS QAIVGSSYLS VIQDILSQIA 240 SYSLENSDQV SYSTTTAGFV PFSSRSLDDA TSEFGSDVIG ISSSQMELQW QKLSGDAKRS 300 HLLTLLQLID ERYTQCLDEI HTVASAFHAA TDLDPRLHTR YTLQSITSVY RNLREKITNC 360 IFTMGVSSNT MCTVEKEKSF EATFIQKQWA LQQLKRKDNQ LWRPQRGLPE RSVSVLRAWM 420 FQNFLHPYPK DTEKHLLAVK SGLTRNQVSN WFINARVRLW KPMIEEMYAE ISRRKSSQND 480 EGFERIRRSQ ISMGRKKM

Sequence ? help Back to Top

Protein Sequence Length: 498 aa Download sequence

MPTALQQIVV GDASQGCLSS SGNTEFQDQL AGTIPITSLF QSTSLSPVNV IRGNTKDSAF  60
SDSQFQPLET FRTCILHSSS NASNSSFATS SLNCEGDESL CNANNKWESH RFHYIQQHTG  120
ENQERLDFQT ISSIENLDLN GWMPSNTMNS KLWNELSLSL ATSQPVVIEG TNCLDQYPQL  180
AFSGATQACL NSTELGSNLN SCNSMDLSLS YGSGSPIHLS QAIVGSSYLS VIQDILSQIA  240
SYSLENSDQV SYSTTTAGFV PFSSRSLDDA TSEFGSDVIG ISSSQMELQW QKLSGDAKRS  300
HLLTLLQLID ERYTQCLDEI HTVASAFHAA TDLDPRLHTR YTLQSITSVY RNLREKITNC  360
IFTMGVSSNT MCTVEKEKSF EATFIQKQWA LQQLKRKDNQ LWRPQRGLPE RSVSVLRAWM  420
FQNFLHPYPK DTEKHLLAVK SGLTRNQVSN WFINARVRLW KPMIEEMYAE ISRRKSSQND  480
EGFERIRRSQ ISMGRKKM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	485	497	RIRRSQISMGRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32980.1	8e-99	TALE family protein