PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022131324.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

bHLH

Protein Properties

Length: 303aa MW: 34189.7 Da PI: 5.7333

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022131324.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	41.6	2.3e-13	106	157	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P++ + ++ + a+i A++++k+L+ XP_022131324.1 106 QRMTHIAVERNRRKQMNEYLAVLRSLMPSS---YVQRGDQASIIGGAINFVKELE 157 79**************************...9****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 303 aa Download sequence
MMALETVVYP QDTFSYVCRD FCSFGGAWEG GYDYGFQLEE QRALLGPIED QKLGSNWEAS 60 PEECSTDQQP LPGAVFPPVE PPPPTTGRRK RRRTRSTKNK EEIENQRMTH IAVERNRRKQ 120 MNEYLAVLRS LMPSSYVQRG DQASIIGGAI NFVKELEQQL QFIKAHKAET QPQIDDASPF 180 AEFFSFPQFS TRATTQCKNS ANDSPMPHQQ WAAAGDIEVT MVDTHANLKI LSRKRPRQLL 240 KMVAGFQTLR LTVLHLNVTT LDQMVLYSVS IKVEEGCQLN TVDEIAAAVN QILLSIQEEA 300 AFS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	89	93	RKRRR
2	89	94	RKRRRT
3	107	118	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72210.1	1e-91	bHLH family protein