PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021692604.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

E2F/DP

Protein Properties

Length: 464aa MW: 51742.5 Da PI: 4.5992

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021692604.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	86.6	1.9e-27	142	207	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++l++++e+gi++ln++a++L +v ++RRiYDi+NVLe+++liekk kn+i+wkg XP_021692604.1 142 RYDSSLGLLTKKFINLIKHAEDGILDLNKAADTL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIQWKG 207 6899****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 464 aa Download sequence
MSNSQLPNPS TRQPQLNAMQ NPLKRQPPFS SMKPPFLAPG DYHRFSTEPR QVADHEVEAI 60 VVKPPPLKRK SDAAYNEAES NEWNTSAGFT EVDNSPLQTP VSGKGGKAPK TSRLSKSSKS 120 GSQTALNLGS PGNNLTPTGP CRYDSSLGLL TKKFINLIKH AEDGILDLNK AADTLEVQKR 180 RIYDITNVLE GIGLIEKKLK NRIQWKGLDV SRPGEADENV ASLQAEVENL NIEEHRLDEQ 240 IREMQERLRD LSEDENNQKW LFVTEEDIKS LPCFQNETLI AIKAPHGTTL EVPDPDEQAV 300 DYPQRRYRIV LRSTMGPIDV YLVSQFEEKF EEIHGIEPTP NYPSTSGFNE NLATTMVAGE 360 SRGKEIEMQG EEAHRMCSDL NTSQDFVSGI MKIVPSDVDS DADYWLLSDA GVSITDMWST 420 EPGVEWNEFG TLHDEYGMAN VSTPRAQTPS NQTEVPSTTN NNAR

Sequence ? help Back to Top

Protein Sequence Length: 464 aa Download sequence

MSNSQLPNPS TRQPQLNAMQ NPLKRQPPFS SMKPPFLAPG DYHRFSTEPR QVADHEVEAI  60
VVKPPPLKRK SDAAYNEAES NEWNTSAGFT EVDNSPLQTP VSGKGGKAPK TSRLSKSSKS  120
GSQTALNLGS PGNNLTPTGP CRYDSSLGLL TKKFINLIKH AEDGILDLNK AADTLEVQKR  180
RIYDITNVLE GIGLIEKKLK NRIQWKGLDV SRPGEADENV ASLQAEVENL NIEEHRLDEQ  240
IREMQERLRD LSEDENNQKW LFVTEEDIKS LPCFQNETLI AIKAPHGTTL EVPDPDEQAV  300
DYPQRRYRIV LRSTMGPIDV YLVSQFEEKF EEIHGIEPTP NYPSTSGFNE NLATTMVAGE  360
SRGKEIEMQG EEAHRMCSDL NTSQDFVSGI MKIVPSDVDS DADYWLLSDA GVSITDMWST  420
EPGVEWNEFG TLHDEYGMAN VSTPRAQTPS NQTEVPSTTN NNAR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22220.2	1e-164	E2F/DP family protein