PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021692595.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Nin-like

Protein Properties

Length: 980aa MW: 107202 Da PI: 5.1788

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021692595.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	92.7	2.6e-29	600	651	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek++sl++l++yFs+++kdAAk++gvc+T+LKriCRq+GI+RWP+Rki+++ XP_021692595.1 600 AEKNVSLSVLQQYFSGSLKDAAKSIGVCPTTLKRICRQHGISRWPSRKINKV 651 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 980 aa Download sequence
MENPFSLKDK GTGYWTSPRA QTDGMAPSDG GARNSISEDP FNHFSEIMNF DTYAGWCNSP 60 SATDQMFASY GLSSLQSTPY ASFDLLSFAE QNSPTSLLGS VLNAAGTSYN SGDKMAFQQA 120 DSQFSYASDL MDADDLGAKQ SNGSQQQSDF LDMDNCMISR PIGFSLDEKM LRALSLLKES 180 AGDGILAQVW VPMRHRDQYI MTTFEQPYLL DQILAGYREV SRTYTFSAEV KPDLPLGLPG 240 RVFISKVPEW TSNVVYYRNT EYLRAKHARH HKVQGSIALP IFEPPEMSCC AVLELVTIKE 300 KPNFDSEMEN VCLALQAVNL RTTAPPRLLP QSLSGNQRAA LTEITDVLRA VCHAHSLPLA 360 LTWIPCNYME EAVDEIIKVR VREGNSRSTG KFVLCIEGTA CYVNDREMQG FVHACSEHYI 420 EEGQGIAGKA LQSNHPFFFP DVKAYDIIEY PLVHHARKYG LNAAVAIRLR STYTGDDDYI 480 LEFFLPVNMK GSSEQQLLLN NLSGTMQRIC KSLRTVSDAE LAGGEGSKVE SQKGAITSFP 540 PMSVSMSNSQ TTLSAANLNL TDKIPSDAAG SKYDGMESDG PHEQVMNRSR RQLEKKRSTA 600 EKNVSLSVLQ QYFSGSLKDA AKSIGVCPTT LKRICRQHGI SRWPSRKINK VNRSLRKIQT 660 VLDSVQGVEG GLKFDPSTGG FVAAGSIVQE KSFLFPDKKL PSRNSESATE DAVSVPAAHI 720 DGNNSSVKVE EDECCVDACG ELLIKSSACV IDCSEDSKLI STDAGICQKG SGGCGPWAAM 780 DNSSTFAKGG KGSLNTGSVK LDNSDTHFVC RSSSSLGATE ELDAKVEGDD GMVEHNWPTC 840 SSMTESSNGS GSMIHGSASS SPSYEEEKHS KVKCDDHGSK ITVKATYKED TIRFKFEPSA 900 GCFQLYEEIA KRFKLQNGTF QLKYLDDEEE WVMLVSDSDL QECVEILDYI GKRSVKFLVR 960 DVAFTMGSSG SSSCFLGGSS

Sequence ? help Back to Top

Protein Sequence Length: 980 aa Download sequence

MENPFSLKDK GTGYWTSPRA QTDGMAPSDG GARNSISEDP FNHFSEIMNF DTYAGWCNSP  60
SATDQMFASY GLSSLQSTPY ASFDLLSFAE QNSPTSLLGS VLNAAGTSYN SGDKMAFQQA  120
DSQFSYASDL MDADDLGAKQ SNGSQQQSDF LDMDNCMISR PIGFSLDEKM LRALSLLKES  180
AGDGILAQVW VPMRHRDQYI MTTFEQPYLL DQILAGYREV SRTYTFSAEV KPDLPLGLPG  240
RVFISKVPEW TSNVVYYRNT EYLRAKHARH HKVQGSIALP IFEPPEMSCC AVLELVTIKE  300
KPNFDSEMEN VCLALQAVNL RTTAPPRLLP QSLSGNQRAA LTEITDVLRA VCHAHSLPLA  360
LTWIPCNYME EAVDEIIKVR VREGNSRSTG KFVLCIEGTA CYVNDREMQG FVHACSEHYI  420
EEGQGIAGKA LQSNHPFFFP DVKAYDIIEY PLVHHARKYG LNAAVAIRLR STYTGDDDYI  480
LEFFLPVNMK GSSEQQLLLN NLSGTMQRIC KSLRTVSDAE LAGGEGSKVE SQKGAITSFP  540
PMSVSMSNSQ TTLSAANLNL TDKIPSDAAG SKYDGMESDG PHEQVMNRSR RQLEKKRSTA  600
EKNVSLSVLQ QYFSGSLKDA AKSIGVCPTT LKRICRQHGI SRWPSRKINK VNRSLRKIQT  660
VLDSVQGVEG GLKFDPSTGG FVAAGSIVQE KSFLFPDKKL PSRNSESATE DAVSVPAAHI  720
DGNNSSVKVE EDECCVDACG ELLIKSSACV IDCSEDSKLI STDAGICQKG SGGCGPWAAM  780
DNSSTFAKGG KGSLNTGSVK LDNSDTHFVC RSSSSLGATE ELDAKVEGDD GMVEHNWPTC  840
SSMTESSNGS GSMIHGSASS SPSYEEEKHS KVKCDDHGSK ITVKATYKED TIRFKFEPSA  900
GCFQLYEEIA KRFKLQNGTF QLKYLDDEEE WVMLVSDSDL QECVEILDYI GKRSVKFLVR  960
DVAFTMGSSG SSSCFLGGSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43500.1	0.0	Nin-like family protein