PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021692542.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | YABBY | ||||||||
Protein Properties | Length: 246aa MW: 28002.3 Da PI: 9.1078 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 197.3 | 6.4e-61 | 6 | 163 | 2 | 163 |
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakas....qllaaeshldeslkeelleelkveeenlksnvekeesa 92 ++f+ +eq+CyvqC+fC+til+vsvP +sl++vvtvrCGhCtsllsvn++k s q la+ sh ++ kee+ e+ +++++l+ ++++s+ XP_021692542.1 6 HLFDLPEQICYVQCGFCDTILLVSVPCSSLSMVVTVRCGHCTSLLSVNMMKVSfvpfQFLASLSH--DQQKEEVSPEEVDAQKALD---IQRSSS 95 7899**********************************************999777677788777..4445555555444444443...444444 PP YABBY 93 stsvsseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahf 163 + s ++l++ +++ v r +++PPekrqr+Psaynrfikeei+r+ka+nP+++h+eafs+aakn + + XP_021692542.1 96 MVAYSDNELED-DRNPVNR--IINKPPEKRQRAPSAYNRFIKEEIRRLKAENPSMAHKEAFSTAAKNVSSM 163 44444444433.3334444..589*******************************************8766 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence |
MATLNHLFDL PEQICYVQCG FCDTILLVSV PCSSLSMVVT VRCGHCTSLL SVNMMKVSFV 60 PFQFLASLSH DQQKEEVSPE EVDAQKALDI QRSSSMVAYS DNELEDDRNP VNRIINKPPE 120 KRQRAPSAYN RFIKEEIRRL KAENPSMAHK EAFSTAAKNV SSMSNHAFFK TLNLDDTNKR 180 STIMFQSWTC SIVFSGPISH QFIIKKVEKV LARKKRRHHG VVMQSRSTLE AKVSMKERFQ 240 GIPPFE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G23420.1 | 7e-66 | YABBY family protein |