PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021692239.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 601aa MW: 64863.4 Da PI: 7.5006

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021692239.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.2	3.9e-18	66	113	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd ll+++v+++G g+W+++ r+ g+ R++k+c++rw ++l XP_021692239.1 66 KGPWTAEEDGLLLEYVRKHGEGNWNAVQRHSGLARCGKSCRLRWANHL 113 79******************************************9986 PP
2	Myb_DNA-binding	47.3	4.8e-15	119	162	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++++eE+ l+v++ +++G++ W++ a ++ gRt++++k++w++ XP_021692239.1 119 KGAFSPEEERLIVELQAKFGNK-WARMATLLP-GRTDNEIKNYWNT 162 799*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 601 aa Download sequence
MMISTGNGSS EGGGSSGSRG GGDSDVAPAA FHQGGGDMHA NVHHGGGGKG GCSGGGDGNG 60 EKHLKKGPWT AEEDGLLLEY VRKHGEGNWN AVQRHSGLAR CGKSCRLRWA NHLRPNLKKG 120 AFSPEEERLI VELQAKFGNK WARMATLLPG RTDNEIKNYW NTRIKRHQRQ GLPLYPPDIQ 180 PQYPPSPHFH HRRSSSVSII PTTPTSSFTF PTTNSATHTL TPTSASPPPL FPTPTATSFP 240 TLPLFDFSQP YHHHTSHSTP TTPTSSFFFQ TQVPSPTHAQ THNCACSTPP PVSPLSSPST 300 KASTCFSTLP LFDFCVSRTP PILQTPMRFK RFSSSPNIAS LTTTNNTSTK SSISPNSHFS 360 LPLSPLPPAS ASNKPLGHQM RSCFSCSEFH NELQKEDQEM CSHLAAVTQP ELPSNQFLST 420 TNQNRNLGIG IATIGSKFGK RATKKKIGNS IKDKVNGNLG WALEDLLQEA KALTECGQTS 480 TEQSSLVLQE QKPELLVSDG FDLHWDQTSS LALSSGLEPE VDIAGQINAM PEDFTKVLNI 540 LPSPMQPELY SDSADISNGP SSVLTDDNIG FEMQQIASLF PPADHGRTLG SCSWDNLPGI 600 C

Sequence ? help Back to Top

Protein Sequence Length: 601 aa Download sequence

MMISTGNGSS EGGGSSGSRG GGDSDVAPAA FHQGGGDMHA NVHHGGGGKG GCSGGGDGNG  60
EKHLKKGPWT AEEDGLLLEY VRKHGEGNWN AVQRHSGLAR CGKSCRLRWA NHLRPNLKKG  120
AFSPEEERLI VELQAKFGNK WARMATLLPG RTDNEIKNYW NTRIKRHQRQ GLPLYPPDIQ  180
PQYPPSPHFH HRRSSSVSII PTTPTSSFTF PTTNSATHTL TPTSASPPPL FPTPTATSFP  240
TLPLFDFSQP YHHHTSHSTP TTPTSSFFFQ TQVPSPTHAQ THNCACSTPP PVSPLSSPST  300
KASTCFSTLP LFDFCVSRTP PILQTPMRFK RFSSSPNIAS LTTTNNTSTK SSISPNSHFS  360
LPLSPLPPAS ASNKPLGHQM RSCFSCSEFH NELQKEDQEM CSHLAAVTQP ELPSNQFLST  420
TNQNRNLGIG IATIGSKFGK RATKKKIGNS IKDKVNGNLG WALEDLLQEA KALTECGQTS  480
TEQSSLVLQE QKPELLVSDG FDLHWDQTSS LALSSGLEPE VDIAGQINAM PEDFTKVLNI  540
LPSPMQPELY SDSADISNGP SSVLTDDNIG FEMQQIASLF PPADHGRTLG SCSWDNLPGI  600
C

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11440.1	5e-59	MYB family protein