PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021692112.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MYB
Protein Properties Length: 298aa    MW: 31626.3 Da    PI: 7.4047
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021692112.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding33.69e-111255445
                     S-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  4 WTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                     WT e d+ + +a + ++ +   +W++Ia+ ++ g+t +++k+++ 
   XP_021692112.1 12 WTREQDKAFENALATYPEDapdRWEKIAADVP-GKTQEEIKLHYE 55
                     ********************************.**********96 PP
2Myb_DNA-binding422.2e-13121165347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT++E+ l++ +  ++G+g+W++I+r +  +Rt+ q+ s+ qky
   XP_021692112.1 121 AWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKY 165
                      6*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MTVDEVGCSS LWTREQDKAF ENALATYPED APDRWEKIAA DVPGKTQEEI KLHYELLVED  60
LNQIEAGCVP LPNYSSSEGS VSHAGDEGTS KKGGHLGHHN SESAHGNKAS RSDQERRKGI  120
AWTEDEHRLF LLGLDKYGKG DWRSISRNFV VTRTPTQVAS HAQKYFIRLN SMNKDRRRSS  180
IHDITSVGNG DISVPQGPIT GQTNGSAAGG SAGKAAKQPP QHPAGPPGVG VYGPPTIGQP  240
IGGPLVSAVG TPVNLSAPTP MAYGVRAPVP GTVSGVVPGA PMSMVPMTYP MPPTTAHR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.11e-110MYB family protein