PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021691972.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

CPP

Protein Properties

Length: 770aa MW: 83876.2 Da PI: 6.6546

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021691972.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	51	2.8e-16	480	518	2	40
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 +k+CnCkkskClk+YCeCfaag++C e C+C+dC+Nk XP_021691972.1 480 ACKRCNCKKSKCLKLYCECFAAGVYCIEPCSCQDCFNKP 518 589**********************************96 PP
2	TCR	50.1	5.6e-16	565	603	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkks+ClkkYCeC++ g+ Cs +C+Ce+CkN XP_021691972.1 565 RHKRGCNCKKSSCLKKYCECYQGGVGCSVNCRCEGCKNA 603 589***********************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 770 aa Download sequence
MDTPEKTQIT TSLSKFEDSP IFNYINSLSP IKPLKSIHIT QTFQSLSFAS VQSIFTSPHV 60 SSHKESRFLR RHNYSDPLKS EFSSENGNKV SSDEGAALDV VQLYDNSSEL QENFDPGVSI 120 GEVSVGPRSE HLKFALELPQ RLKYDCGSPE CDATPRCGPQ IDCTSELAGV SQKCSPECKV 180 HPQGIYQTEQ KEEASDCDWE NLMSDATGLL IFNSPIDTKA FKGLRQKSLD LGASFSASVD 240 DVHKGGIDPV DSGEQHEMEY PSTQPGETIV PKEINQIRDN LAANNNPNKC MTSNLSEEME 300 NEVGISTGVV SKAVSILHCG MRRRCLDFET VGAHRKKLSN GSNSSTSVGG QSDEKIASKD 360 KQLVPFKPGS DSSRCVLPGI GLHLNALAIT SKDTKNAKHE TLSSVISLPS TVASFHSPST 420 GQELNESLSL AAADVDMDPT ESDVPLVEDV PQTSACLVTE EFKHSSPKKK RHKLEGESEA 480 CKRCNCKKSK CLKLYCECFA AGVYCIEPCS CQDCFNKPIH EDTVLATRKQ IESRNPLAFA 540 PKVIRSSETA IEIGDESSKT PASARHKRGC NCKKSSCLKK YCECYQGGVG CSVNCRCEGC 600 KNAFGIKDGS APTEKEAEPE DETGGENSII LQKTEMQNNE EQNPNSALPM TPLALCRQLL 660 QLPFSSKTKP PRSFLSVGSS SGFYPGPKYG KPNILRPRPK LETQVQTPHD DDMPEILRGN 720 FSPSTGIKTS PNSKRVSPPH SILGSSPGRR SGRKLILQSI PSFPSLTPQH

Sequence ? help Back to Top

Protein Sequence Length: 770 aa Download sequence

MDTPEKTQIT TSLSKFEDSP IFNYINSLSP IKPLKSIHIT QTFQSLSFAS VQSIFTSPHV  60
SSHKESRFLR RHNYSDPLKS EFSSENGNKV SSDEGAALDV VQLYDNSSEL QENFDPGVSI  120
GEVSVGPRSE HLKFALELPQ RLKYDCGSPE CDATPRCGPQ IDCTSELAGV SQKCSPECKV  180
HPQGIYQTEQ KEEASDCDWE NLMSDATGLL IFNSPIDTKA FKGLRQKSLD LGASFSASVD  240
DVHKGGIDPV DSGEQHEMEY PSTQPGETIV PKEINQIRDN LAANNNPNKC MTSNLSEEME  300
NEVGISTGVV SKAVSILHCG MRRRCLDFET VGAHRKKLSN GSNSSTSVGG QSDEKIASKD  360
KQLVPFKPGS DSSRCVLPGI GLHLNALAIT SKDTKNAKHE TLSSVISLPS TVASFHSPST  420
GQELNESLSL AAADVDMDPT ESDVPLVEDV PQTSACLVTE EFKHSSPKKK RHKLEGESEA  480
CKRCNCKKSK CLKLYCECFA AGVYCIEPCS CQDCFNKPIH EDTVLATRKQ IESRNPLAFA  540
PKVIRSSETA IEIGDESSKT PASARHKRGC NCKKSSCLKK YCECYQGGVG CSVNCRCEGC  600
KNAFGIKDGS APTEKEAEPE DETGGENSII LQKTEMQNNE EQNPNSALPM TPLALCRQLL  660
QLPFSSKTKP PRSFLSVGSS SGFYPGPKYG KPNILRPRPK LETQVQTPHD DDMPEILRGN  720
FSPSTGIKTS PNSKRVSPPH SILGSSPGRR SGRKLILQSI PSFPSLTPQH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	467	474	PKKKRHKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	1e-162	CPP family protein