PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021691881.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 371aa MW: 41953.2 Da PI: 6.9069 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 63.9 | 1.8e-20 | 15 | 58 | 2 | 45 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45 + en+ rq t+ kR++gi+KKA+ELS+LCd+++ +++fs+tgk XP_021691881.1 15 KLENTNGRQATYGKRKHGIMKKAKELSILCDIDIILLMFSPTGK 58 6799**************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 371 aa Download sequence |
MQPYMMGRVK LKIKKLENTN GRQATYGKRK HGIMKKAKEL SILCDIDIIL LMFSPTGKPS 60 ICKGKRSIEE VIAKFAQLTP QERAKRKLES LEVLKKTFKK LDHDVNIPEF LGTSSQTVED 120 LSNQSRLLQN QLSEAHKRLS YWTNPDKINN IEHLDQLENS LRESLNQLRA HKDYLGEQQL 180 MSLECNNQFQ NGMHVPFRVG ADQQVPPMPW IPNNDSQPIV LPEDPNLLPH RDVECSASSS 240 FGSYSGYFGT GKSSELSNSS QENGVNGLLN ELNGTASLRL QLAGQYPYLP NNLNLLNDEK 300 FQPAAEMNLQ ESPVDFHVNG SFEAPKPGYD TTHGSWASSS GPCAVTMFDE HFYSRKDHLY 360 GSNNEEYYRI S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G03060.2 | 2e-82 | M-type_MADS family protein |