PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021691845.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 562aa MW: 60503.3 Da PI: 9.5139

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021691845.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.2	2.9e-05	66	88	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C+k F r nL+ H r H XP_021691845.1 66 FICEVCNKGFQREQNLQLHRRGH 88 89*******************88 PP
2	zf-C2H2	13.2	0.00027	142	164	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k++ +s+ k H +t+ XP_021691845.1 142 WKCEKCSKRYAVQSDWKAHSKTC 164 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 562 aa Download sequence
MAAASSSASF FRSREENQNQ MMQQNSSTAA PTTAPQKKKR NQPGAPNPDA EVIALSPKTL 60 MATNRFICEV CNKGFQREQN LQLHRRGHNL PWKLKQKTTK EVKRKVYLCP EPTCVHHDPS 120 RALGDLTGIK KHYSRKHGEK KWKCEKCSKR YAVQSDWKAH SKTCGTREYR CDCGTLFSRR 180 DSFITHRAFC DALAQESARH PTSLSTIGTH LYGNNHMCLG LSQVGSQIPP LQDQNHPTSK 240 MLRLGSAGAA KFEHIIPPSN SSSAFFMSDA NQVSFPNKSL HGLMQLPDLQ STTNNSSSTN 300 LFNLGYFSNN AAAPNRMSNS DNANSSTTTT NLVNYRFLNP NPFNNGNGGQ GMTTLFDNNM 360 GDHVGSAGIP SLYSNSMQQE NITPHMSATA LLQKAAQMGS TTSSNNSNLL RALGGSPSTG 420 TKSDRPPLVS TNNFGSNSFG NATVGEGGLG AQMESDNQLQ GLMNSLANGG SSFFGGGPGQ 480 DNGFGGFTSS GISLEQPHNS TNFSNVEEAN LHQTLGVGSD KLTLDFLGVG GMVRSIGGGQ 540 HGINLSPVDT EIKSAQAINK PF

Sequence ? help Back to Top

Protein Sequence Length: 562 aa Download sequence

MAAASSSASF FRSREENQNQ MMQQNSSTAA PTTAPQKKKR NQPGAPNPDA EVIALSPKTL  60
MATNRFICEV CNKGFQREQN LQLHRRGHNL PWKLKQKTTK EVKRKVYLCP EPTCVHHDPS  120
RALGDLTGIK KHYSRKHGEK KWKCEKCSKR YAVQSDWKAH SKTCGTREYR CDCGTLFSRR  180
DSFITHRAFC DALAQESARH PTSLSTIGTH LYGNNHMCLG LSQVGSQIPP LQDQNHPTSK  240
MLRLGSAGAA KFEHIIPPSN SSSAFFMSDA NQVSFPNKSL HGLMQLPDLQ STTNNSSSTN  300
LFNLGYFSNN AAAPNRMSNS DNANSSTTTT NLVNYRFLNP NPFNNGNGGQ GMTTLFDNNM  360
GDHVGSAGIP SLYSNSMQQE NITPHMSATA LLQKAAQMGS TTSSNNSNLL RALGGSPSTG  420
TKSDRPPLVS TNNFGSNSFG NATVGEGGLG AQMESDNQLQ GLMNSLANGG SSFFGGGPGQ  480
DNGFGGFTSS GISLEQPHNS TNFSNVEEAN LHQTLGVGSD KLTLDFLGVG GMVRSIGGGQ  540
HGINLSPVDT EIKSAQAINK PF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02070.1	1e-121	C2H2 family protein