PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021691569.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

TCP

Protein Properties

Length: 366aa MW: 40540.3 Da PI: 9.5573

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021691569.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	101.2	1.8e-31	48	187	2	133
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg........ 88 g+kdrhsk+ T +g+RdRRvRls+++a++++dLqd+LG+ ++sk ++WLl++ak++i+el+ ++ ++ ++ +++ ++s++ + XP_021691569.1 48 FGGKDRHSKVFTIRGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLNAAKHEIDELPPLPMPPVNFGLNHQAILTSSHEVGAsqsnkegf 142 689*************************************************************8888755533333333332222211111133 PP TCP 89 ....................kaaksaakskksqksaasalnlakesr.....akarararertrekmrik 133 + + ak+++ ar++ +ek + + XP_021691569.1 143 ktsssinwedpdgltrpnfwS-------------------------SdallkAKSKEIARDSVHEKENWT 187 333333333333333333320.........................023333444444444444443333 PP

Sequence ? help Back to Top
Protein Sequence Length: 366 aa Download sequence
MITSSQEVDS PRKKEGDTSH GKITKASSSS TPWLKLKDPR IVRVSRAFGG KDRHSKVFTI 60 RGLRDRRVRL SVPTAIQLYD LQDRLGLNQP SKVVDWLLNA AKHEIDELPP LPMPPVNFGL 120 NHQAILTSSH EVGASQSNKE GFKTSSSINW EDPDGLTRPN FWSSDALLKA KSKEIARDSV 180 HEKENWTKRN DQEDKKESNE GHGSSLQVPS SSFFPRASYS SLPGLINNAM PYGSFFQVEH 240 QNLPLSHLGS HGFAAQTDDL HNLNAVPLPS TLSLSSGSQI LVCPPGTAQP YFPSRVTGAS 300 PETDPRQMNH FQMLSSSTQN LFPNSLTPSP YSMNQSTRPF RATPRLVHSL NSGSHQPDNK 360 EEFPCK

Sequence ? help Back to Top

Protein Sequence Length: 366 aa Download sequence

MITSSQEVDS PRKKEGDTSH GKITKASSSS TPWLKLKDPR IVRVSRAFGG KDRHSKVFTI  60
RGLRDRRVRL SVPTAIQLYD LQDRLGLNQP SKVVDWLLNA AKHEIDELPP LPMPPVNFGL  120
NHQAILTSSH EVGASQSNKE GFKTSSSINW EDPDGLTRPN FWSSDALLKA KSKEIARDSV  180
HEKENWTKRN DQEDKKESNE GHGSSLQVPS SSFFPRASYS SLPGLINNAM PYGSFFQVEH  240
QNLPLSHLGS HGFAAQTDDL HNLNAVPLPS TLSLSSGSQI LVCPPGTAQP YFPSRVTGAS  300
PETDPRQMNH FQMLSSSTQN LFPNSLTPSP YSMNQSTRPF RATPRLVHSL NSGSHQPDNK  360
EEFPCK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02150.1	3e-49	TCP family protein