PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021690983.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 1780aa MW: 201575 Da PI: 8.5216

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021690983.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.4	0.001	1664	1689	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 y+C C++sF +k +L H ++ + XP_021690983.1 1664 YQCDieGCTMSFGTKQELAMHKKNiC 1689 99*******************99866 PP
2	zf-C2H2	14.1	0.00014	1689	1711	3	23
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 Cp Cgk+F ++ +L++H r+H XP_021690983.1 1689 CPvkGCGKTFFSHKYLVQHRRVH 1711 9999*****************99 PP
3	zf-C2H2	11.5	0.00093	1747	1773	1	23
EEET..TTTEEESSHHHHHHHHHH..T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt..H 23 y+C Cg++F+ s++ rH r+ H XP_021690983.1 1747 YVCAeeGCGQTFRFVSDFSRHKRKtgH 1773 89********************99666 PP

Sequence ? help Back to Top
Protein Sequence Length: 1780 aa Download sequence
MAASGGLVSE PTSQQEVFQW LKNLPLAPEY HPTPAEFQDP IAYIFKIEKE AAKYGICKIV 60 PPVLAAPKKA AISNLNRSLA ARADSSSSKS PPTFTTRQQQ IGFCPRKPRP VQKPVWQSGE 120 NYTFQEFETK AKSFERSYLK KCSKKGALSP LEIETLYWKA TVDKPFSVEY ANDMPGSAFS 180 PKKTGGKEVA EGATVGETEW NMRGVSRAKG SLLRFMKEEI PGVTSPMVYV AMMFSWFAWH 240 VEDHDLHSLN YLHMGAGKTW YGVPREAAVA FEEVVRVHGY GEEMNPLVTF AILGEKTTVM 300 SPEVFVNAGV PCCRLVQNAG EFVVTFPRAY HSGFSHGFNC GEAANIATPE WLRVAKDAAI 360 RRASINYPPM VSHFQLLYDL ALELCTRMPV SITAKPRSSR LKDKQKGEGE TLVKELFVKN 420 VIHNNGLLHI LGKGSSVVLL PRSSSDISVC SNLRVGSQLR ASPSLGLCSN KVIMKSSKDS 480 VPDEIMPERN NKINQAKGLF SVKEKFASLC ERNRFSSLNG NDSMHTMDTG IANGETVHGD 540 KLSDQRLFSC VTCGILSFDC IAVIQPREAA ARYLMSADCS FFNDWIVGSG VTNDRFTIAL 600 GDSNTAEQNS STKWLKKNTV DGLYDVPIQS ANHQIQMTDQ NKVASNAETQ RATSALGLLA 660 LNYGNSSDSE EDQCEPDVSH DPAEINMTNC SLERKYQHQI SALPSFKQEC HHDETGSHTI 720 SLSRPDHRDE VTLQTLDGHA EQGHGHGPAN LKDGSDQTLD SSVEFEIDNL ASMESNGLED 780 TFRDPMSMSL TTSSCSPVVH DTEKAKFSRV GVPREDTETS FAQRSDEDSS RMHIFCLEHA 840 VEVEQQFRPI GGVNILLLCH PEYPRIEAEA KLVTEELGID CLWNDITFRD ATKEDEENIQ 900 SALDSEEAIP GNGDWAVKLG INLFYSANLS RSSLYSKQMP YNSVIYNAFG RVSPASSPTK 960 FNVYGRKSSK QKKVVAGRWC GKVWMSNQVH PFLTKRDSED QDQEQDQDIS FHGWTRRGEK 1020 LERKSENVYR TETTLVTRKS GRKRKMMVAS GPGKKVKSLD AGDAASEDSE EDVSHKQHTR 1080 VYSRKQTKRI EREVSYDSLE DNSHPHYGRT HRSKQAKSVE REDAISDDSL RCNSHQHRRI 1140 PRSKQARSTE SENDISYAYA DNNSQKQHRR IHRTRSNQAK YVERKSEISD DSLEGDIHDW 1200 NGRLSKSTQA KFRREDAVSD DSLEESSHRP LRRVHRTKPA KYFEKEDAIS DDSLENSSLQ 1260 QNRRISGGSQ AKSIERDDEV SDDMLEASAY QQHTGSHRSR ASKFFDREGA VCDDLLEDNT 1320 YQQRMRIFRT KQAKIFKMEN AISDDSLEEN IQQQRRGIHR SKRAKFVESE DAVSDDLLAD 1380 DTRLEHKRMP RRKKAKFVER EDVSDDLLGD NGQWQLRKTP RGKQAKFIES EDVSDDLQED 1440 THWHPRKSSR RKQAASIERE DVSDDLEEGN THWQPKKTPR GKQAKFIDRE DVSDDLQEDD 1500 TRWQPRKTPR GKQAKLIERE DAVSDDLVED NSNQQHQRIL RSKQKKPVTL GKMKRGAVQH 1560 VKQGTFRLRK KENLRSVKQE KQMKPETPRL RNAKGEHNAR QFESHVEEEL EGGPSTRLRK 1620 RPSKPSKESE IKLKEKLQSN RKKVKSGSAG GQKNVKNKFE DAEYQCDIEG CTMSFGTKQE 1680 LAMHKKNICP VKGCGKTFFS HKYLVQHRRV HLDDRPLKCP WKGCKMTFKW AWARTEHIRV 1740 HTGARPYVCA EEGCGQTFRF VSDFSRHKRK TGHSVKKSRG

Sequence ? help Back to Top

Protein Sequence Length: 1780 aa Download sequence

MAASGGLVSE PTSQQEVFQW LKNLPLAPEY HPTPAEFQDP IAYIFKIEKE AAKYGICKIV  60
PPVLAAPKKA AISNLNRSLA ARADSSSSKS PPTFTTRQQQ IGFCPRKPRP VQKPVWQSGE  120
NYTFQEFETK AKSFERSYLK KCSKKGALSP LEIETLYWKA TVDKPFSVEY ANDMPGSAFS  180
PKKTGGKEVA EGATVGETEW NMRGVSRAKG SLLRFMKEEI PGVTSPMVYV AMMFSWFAWH  240
VEDHDLHSLN YLHMGAGKTW YGVPREAAVA FEEVVRVHGY GEEMNPLVTF AILGEKTTVM  300
SPEVFVNAGV PCCRLVQNAG EFVVTFPRAY HSGFSHGFNC GEAANIATPE WLRVAKDAAI  360
RRASINYPPM VSHFQLLYDL ALELCTRMPV SITAKPRSSR LKDKQKGEGE TLVKELFVKN  420
VIHNNGLLHI LGKGSSVVLL PRSSSDISVC SNLRVGSQLR ASPSLGLCSN KVIMKSSKDS  480
VPDEIMPERN NKINQAKGLF SVKEKFASLC ERNRFSSLNG NDSMHTMDTG IANGETVHGD  540
KLSDQRLFSC VTCGILSFDC IAVIQPREAA ARYLMSADCS FFNDWIVGSG VTNDRFTIAL  600
GDSNTAEQNS STKWLKKNTV DGLYDVPIQS ANHQIQMTDQ NKVASNAETQ RATSALGLLA  660
LNYGNSSDSE EDQCEPDVSH DPAEINMTNC SLERKYQHQI SALPSFKQEC HHDETGSHTI  720
SLSRPDHRDE VTLQTLDGHA EQGHGHGPAN LKDGSDQTLD SSVEFEIDNL ASMESNGLED  780
TFRDPMSMSL TTSSCSPVVH DTEKAKFSRV GVPREDTETS FAQRSDEDSS RMHIFCLEHA  840
VEVEQQFRPI GGVNILLLCH PEYPRIEAEA KLVTEELGID CLWNDITFRD ATKEDEENIQ  900
SALDSEEAIP GNGDWAVKLG INLFYSANLS RSSLYSKQMP YNSVIYNAFG RVSPASSPTK  960
FNVYGRKSSK QKKVVAGRWC GKVWMSNQVH PFLTKRDSED QDQEQDQDIS FHGWTRRGEK  1020
LERKSENVYR TETTLVTRKS GRKRKMMVAS GPGKKVKSLD AGDAASEDSE EDVSHKQHTR  1080
VYSRKQTKRI EREVSYDSLE DNSHPHYGRT HRSKQAKSVE REDAISDDSL RCNSHQHRRI  1140
PRSKQARSTE SENDISYAYA DNNSQKQHRR IHRTRSNQAK YVERKSEISD DSLEGDIHDW  1200
NGRLSKSTQA KFRREDAVSD DSLEESSHRP LRRVHRTKPA KYFEKEDAIS DDSLENSSLQ  1260
QNRRISGGSQ AKSIERDDEV SDDMLEASAY QQHTGSHRSR ASKFFDREGA VCDDLLEDNT  1320
YQQRMRIFRT KQAKIFKMEN AISDDSLEEN IQQQRRGIHR SKRAKFVESE DAVSDDLLAD  1380
DTRLEHKRMP RRKKAKFVER EDVSDDLLGD NGQWQLRKTP RGKQAKFIES EDVSDDLQED  1440
THWHPRKSSR RKQAASIERE DVSDDLEEGN THWQPKKTPR GKQAKFIDRE DVSDDLQEDD  1500
TRWQPRKTPR GKQAKLIERE DAVSDDLVED NSNQQHQRIL RSKQKKPVTL GKMKRGAVQH  1560
VKQGTFRLRK KENLRSVKQE KQMKPETPRL RNAKGEHNAR QFESHVEEEL EGGPSTRLRK  1620
RPSKPSKESE IKLKEKLQSN RKKVKSGSAG GQKNVKNKFE DAEYQCDIEG CTMSFGTKQE  1680
LAMHKKNICP VKGCGKTFFS HKYLVQHRRV HLDDRPLKCP WKGCKMTFKW AWARTEHIRV  1740
HTGARPYVCA EEGCGQTFRF VSDFSRHKRK TGHSVKKSRG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	1632	1643	KLKEKLQSNRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48430.1	0.0	C2H2 family protein