PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021690733.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family GRAS
Protein Properties Length: 441aa    MW: 47813 Da    PI: 6.0954
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021690733.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS381.78.9e-117794383374
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                      lLl+cAe+v+ ++l  a+ lL ++sel+sp g++ +R+ ayf+ AL+ar+++s+ ++y+ l++++ + ++s++ ++a++ ++ +sP++kfsh+t
  XP_021690733.1  79 GLLLQCAECVAMDNLDDASDLLPEISELSSPFGSSPERVGAYFAHALHARVVSSCLGTYSPLTSKSLTLTQSQKIFNAFQSYNSISPLIKFSHFT 173
                     58********************************************************************************************* PP

            GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlele 192
                     aNq I +a++ge+rvH+iD+di+qGlQWp L++ LasR+++  s+RiTg+gs    s+e le+tg+rLa+fA++lg+pfef+++  k  +  +++
  XP_021690733.1 174 ANQSIFQALDGEDRVHVIDLDIMQGLQWPGLFHILASRTKKVRSMRITGFGS----SSELLESTGKRLADFANSLGLPFEFHPVEGKIGNVTDVS 264
                     ****************************************************....9**************************7666666679** PP

            GRAS 193 eLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvEr 287
                     +L v+p+Ea++V++++  h l+d ++s       +L+l+  l+Pk+++ veq+++h ++sFl rf+eal+yysalfd+l  +l+++s er++vE+
  XP_021690733.1 265 QLGVRPREAVVVHWMH--HCLYDITGSDLG----TLRLLTLLRPKLITTVEQDLSH-GGSFLGRFVEALHYYSALFDALGDGLGADSVERHTVEQ 352
                     **************99..777777777777....9*********************.789*********************************** PP

            GRAS 288 ellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     +l+g ei+n+va  g +r+ + + +e+W + l+++GF+pv+l+ + a+qa+lll +++++gy++ ee+g+l lgWkd +L+++SaWr
  XP_021690733.1 353 QLFGSEIRNIVAVGGPKRTGEVK-VERWGDELRRVGFQPVSLGGNPAAQASLLLGMFPWKGYTLVEENGCLKLGWKDLSLLTASAWR 438
                     *****************998887.9*************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 441 aa     Download sequence    
MLQSLVPQSP INSSSKPNNS TSSMKTKRVD KELAGGDASG GADDPSAKRP NFSTEATVSG  60
DKTTGEEDST ESTGLRLLGL LLQCAECVAM DNLDDASDLL PEISELSSPF GSSPERVGAY  120
FAHALHARVV SSCLGTYSPL TSKSLTLTQS QKIFNAFQSY NSISPLIKFS HFTANQSIFQ  180
ALDGEDRVHV IDLDIMQGLQ WPGLFHILAS RTKKVRSMRI TGFGSSSELL ESTGKRLADF  240
ANSLGLPFEF HPVEGKIGNV TDVSQLGVRP REAVVVHWMH HCLYDITGSD LGTLRLLTLL  300
RPKLITTVEQ DLSHGGSFLG RFVEALHYYS ALFDALGDGL GADSVERHTV EQQLFGSEIR  360
NIVAVGGPKR TGEVKVERWG DELRRVGFQP VSLGGNPAAQ ASLLLGMFPW KGYTLVEENG  420
CLKLGWKDLS LLTASAWRPS E
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41920.11e-179GRAS family protein