PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021690601.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Nin-like

Protein Properties

Length: 941aa MW: 104379 Da PI: 6.6637

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021690601.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	92.4	3.3e-29	630	680	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek+isle+l++yF++++kdAAk++gvc+T+LKriCRq+GI RWP+Rkik++ XP_021690601.1 630 EKTISLEVLRQYFAGSLKDAAKSIGVCPTTLKRICRQHGITRWPSRKIKKV 680 79***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 941 aa Download sequence
MDDGSFKPDS VSGSFSGTAM DLDFIDELLY DGCWLESTDG LKISQPGLSS STVPNDSSQY 60 FPFVESNSSL LSANLNQQIH REATKNNFPE NPPLSIPKVE QIADNESQNQ NSVKITTSSV 120 SEGLLKEGSE LGTSLWIGPR ADPGPSSSVE KRLMHAIGQL KECTKDREVL VQIWVPTKKE 180 GKHVLTTIDQ PCFLSLKCES LASYRNVSES YHFPLEGNSK ESLGLPGRVF LGKLPESTPD 240 VRFFRNDEYP RRNYAKRYNI SGSLAVPIFE RGTGTCLGVV EVVTTSQYIN YRPELETICK 300 ALEAVDLRSS QDFCPPSVKA CKEFCQAAVP EISEILGSVC KTHKLPLALT WAPCFQQGKG 360 GCRHFDENFA NCISTVDSAC FVDDREFLVF HVACSEQFLS LGQGIVGKAF VTNKQCFASD 420 ITAFSKTDYP LSHHAKVLGL DAAVAIPLRS TNDGSTDFVL ELFLPKDCRD TEEQKRMQDL 480 LPIAIQQACW SLQVIMDKEP EEDINWQMAI ASDERHNKKE SHMFVSSSFN ESYPERSSWI 540 AQMLEAQQKG KSLCVSSDSP KGPKEEFKVA THWDDTLEKL YQKQVFAESG QLQQNSGHKD 600 STEGGINSSF AGQQSSGSRK VGEKRRTKTE KTISLEVLRQ YFAGSLKDAA KSIGVCPTTL 660 KRICRQHGIT RWPSRKIKKV GHSLKKLQLV IDSVQGAEGA IQIGSFYATF PELTSPSFCR 720 NDPFPSLKMN DNLEPLNPQP EVGISNAVAA ASKSPSSSCS QSSGSSISCS TRTKEHAITN 780 IALNAEDALA IKDLGGVLKR TRSDAELHAL YREEPKPLAR SQSHKILGDG PSLDQILLPF 840 TKRRGKSLRE SGAFRVKANF GEDKVRFSLQ PSWGFKELQQ ELAKRFNIND VCRIDLKYLD 900 DDHEWVLLTC DADLEECKDI YRLSQSHTIK LSVQKASQNL R

Sequence ? help Back to Top

Protein Sequence Length: 941 aa Download sequence

MDDGSFKPDS VSGSFSGTAM DLDFIDELLY DGCWLESTDG LKISQPGLSS STVPNDSSQY  60
FPFVESNSSL LSANLNQQIH REATKNNFPE NPPLSIPKVE QIADNESQNQ NSVKITTSSV  120
SEGLLKEGSE LGTSLWIGPR ADPGPSSSVE KRLMHAIGQL KECTKDREVL VQIWVPTKKE  180
GKHVLTTIDQ PCFLSLKCES LASYRNVSES YHFPLEGNSK ESLGLPGRVF LGKLPESTPD  240
VRFFRNDEYP RRNYAKRYNI SGSLAVPIFE RGTGTCLGVV EVVTTSQYIN YRPELETICK  300
ALEAVDLRSS QDFCPPSVKA CKEFCQAAVP EISEILGSVC KTHKLPLALT WAPCFQQGKG  360
GCRHFDENFA NCISTVDSAC FVDDREFLVF HVACSEQFLS LGQGIVGKAF VTNKQCFASD  420
ITAFSKTDYP LSHHAKVLGL DAAVAIPLRS TNDGSTDFVL ELFLPKDCRD TEEQKRMQDL  480
LPIAIQQACW SLQVIMDKEP EEDINWQMAI ASDERHNKKE SHMFVSSSFN ESYPERSSWI  540
AQMLEAQQKG KSLCVSSDSP KGPKEEFKVA THWDDTLEKL YQKQVFAESG QLQQNSGHKD  600
STEGGINSSF AGQQSSGSRK VGEKRRTKTE KTISLEVLRQ YFAGSLKDAA KSIGVCPTTL  660
KRICRQHGIT RWPSRKIKKV GHSLKKLQLV IDSVQGAEGA IQIGSFYATF PELTSPSFCR  720
NDPFPSLKMN DNLEPLNPQP EVGISNAVAA ASKSPSSSCS QSSGSSISCS TRTKEHAITN  780
IALNAEDALA IKDLGGVLKR TRSDAELHAL YREEPKPLAR SQSHKILGDG PSLDQILLPF  840
TKRRGKSLRE SGAFRVKANF GEDKVRFSLQ PSWGFKELQQ ELAKRFNIND VCRIDLKYLD  900
DDHEWVLLTC DADLEECKDI YRLSQSHTIK LSVQKASQNL R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35270.1	0.0	Nin-like family protein