PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021690100.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family M-type_MADS
Protein Properties Length: 296aa    MW: 33843.1 Da    PI: 9.92
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021690100.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF53.23.8e-171151343
                    --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TT CS
          SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsst 43
                    i n+  r +t+ kR++g++KK +ELS+LCd++++vii++++
  XP_021690100.1 11 IMNEKSRMITYHKRKKGLIKKLQELSILCDVDACVIILGPN 51
                    88999**********************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MGRGKLNMEL IMNEKSRMIT YHKRKKGLIK KLQELSILCD VDACVIILGP NLNNRPIDVE  60
TWPTDRYDMR RIINRFLSMG NERRKNQDLS GFFVARQKKL DDEIAKLRKA CLKAKFPTWD  120
NRLNLWQYHE LTLLDGVLGS KLEIATSRVL KSKGDNYLMF GSIDEGGSSN NKSFKSSSMA  180
STFANALRQK NMEFEVLEQE PLSFVNLSHQ TLPQMPPFNL DSLNSPMLMM MKMTNGEGIS  240
QFGGECSSKR SWSPFKAPTN AMMMNNPGDH PVRYWSKHAA ARVDECFFSS TYSSIL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G55690.14e-21M-type_MADS family protein