PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_021689709.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
|
||||||||
Family | MYB_related | ||||||||
Protein Properties | Length: 89aa MW: 10535 Da PI: 4.7576 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 25.4 | 3.2e-08 | 28 | 68 | 3 | 45 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 ++T++E++l+ + ++ G++ W++Ia +++ gR ++++ +w XP_021689709.1 28 KMTEQEEDLIHRMYRLVGNR-WDLIAGRIP-GRKAEEIERFWT 68 68******************.*********.*********995 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 89 aa Download sequence |
MDDCCQKQNK TASCSSEEVS SIEWESIKMT EQEEDLIHRM YRLVGNRWDL IAGRIPGRKA 60 EEIERFWTMR DIIKNLQREE ISIKLAETS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G53200.1 | 9e-24 | MYB_related family protein |