PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021688961.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

FAR1

Protein Properties

Length: 812aa MW: 93260.6 Da PI: 7.7183

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021688961.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	61.7	2.2e-19	80	154	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 +fY +YA ++GF+vr+ + ++s+++g++ +r+fvCskeg++ ++ r gC a ++v+++++gkw++++++++HnHel XP_021688961.1 80 EFYGAYAMSIGFRVRTGQLYRSRTDGSVSSRRFVCSKEGFQLNS--------------RSGCPAFIRVQRRDSGKWMIDQIHKDHNHEL 154 6*************************************9874..............678************************98 PP
2	FAR1	62.2	1.5e-19	246	319	2	89
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 Y+ YA +GF++r+ + +sk++g+it+r+fvCskeg++++ +r+gC a +++k++++g+w v++l+++HnH++ XP_021688961.1 246 LYQVYADGAGFRIRIGQLFRSKNDGSITSRRFVCSKEGFQHP--------------SRVGCGAFMRIKRQESGTWIVDRLQKDHNHDF 319 7************************************999..............4899************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 812 aa Download sequence
MLSLPFPDNM GFHPSSGLFN NIRSSETNPN SEECGTAMIV KAYPLGMTRV NNRVNGEDEG 60 ESRHEPCIGL EFDSADEARE FYGAYAMSIG FRVRTGQLYR SRTDGSVSSR RFVCSKEGFQ 120 LNSRSGCPAF IRVQRRDSGK WMIDQIHKDH NHELGLIDES HPPILQKRAP RAKKSSAEVL 180 STPKFKLTEV SQRPKFKLIE DVDNERSCPS GIINVKRFKK GGDEGQFKAE PYVGLVFNSV 240 DEAYQLYQVY ADGAGFRIRI GQLFRSKNDG SITSRRFVCS KEGFQHPSRV GCGAFMRIKR 300 QESGTWIVDR LQKDHNHDFE LQTGTHQKSS NASKKFIDDV NGDVNGGLDS LDIAKINYGS 360 PIGRARENNI GSDWYRLLLD YFQTKQAEDT GFFYSVEADN GSCMCVFWAD GRSRFSCSQF 420 GDSIVFDTSF RKGNYLVPFA TFVGVNHHKQ PVLLACALLA NVSEDSFTWL FQTWLRAMSG 480 CRPKCIIADQ DVAIQQAIVK VFPGTHHRFS MWQIRAKERE NLRSMTEEFK YEYEKCIYQS 540 QTSVEFNTMW SGLINRYALN ENAWLREMYE KCESWVPLYL RGKFCAGIPI NESLESFFGT 600 LLNAQTPLED FISRFEQGLA RRRDEERKED FNCYNLQAFL HTKEPVEEQC RRLYTLTVFK 660 IFQSELLQCY NYLGIKTYEE GTISRYSVRR CGNEIEKHAV TCCASNLNVR CSCQMFEFEG 720 ILCRHVLRVF NLLDIKEIPP CYILHRWTKD AEYGTIGDIE SGVSPQELKS LIMWSLRETA 780 CKFVEAGTTS LEKYKIAYEI MREGGIKLHW QR

Sequence ? help Back to Top

Protein Sequence Length: 812 aa Download sequence

MLSLPFPDNM GFHPSSGLFN NIRSSETNPN SEECGTAMIV KAYPLGMTRV NNRVNGEDEG  60
ESRHEPCIGL EFDSADEARE FYGAYAMSIG FRVRTGQLYR SRTDGSVSSR RFVCSKEGFQ  120
LNSRSGCPAF IRVQRRDSGK WMIDQIHKDH NHELGLIDES HPPILQKRAP RAKKSSAEVL  180
STPKFKLTEV SQRPKFKLIE DVDNERSCPS GIINVKRFKK GGDEGQFKAE PYVGLVFNSV  240
DEAYQLYQVY ADGAGFRIRI GQLFRSKNDG SITSRRFVCS KEGFQHPSRV GCGAFMRIKR  300
QESGTWIVDR LQKDHNHDFE LQTGTHQKSS NASKKFIDDV NGDVNGGLDS LDIAKINYGS  360
PIGRARENNI GSDWYRLLLD YFQTKQAEDT GFFYSVEADN GSCMCVFWAD GRSRFSCSQF  420
GDSIVFDTSF RKGNYLVPFA TFVGVNHHKQ PVLLACALLA NVSEDSFTWL FQTWLRAMSG  480
CRPKCIIADQ DVAIQQAIVK VFPGTHHRFS MWQIRAKERE NLRSMTEEFK YEYEKCIYQS  540
QTSVEFNTMW SGLINRYALN ENAWLREMYE KCESWVPLYL RGKFCAGIPI NESLESFFGT  600
LLNAQTPLED FISRFEQGLA RRRDEERKED FNCYNLQAFL HTKEPVEEQC RRLYTLTVFK  660
IFQSELLQCY NYLGIKTYEE GTISRYSVRR CGNEIEKHAV TCCASNLNVR CSCQMFEFEG  720
ILCRHVLRVF NLLDIKEIPP CYILHRWTKD AEYGTIGDIE SGVSPQELKS LIMWSLRETA  780
CKFVEAGTTS LEKYKIAYEI MREGGIKLHW QR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G06250.1	0.0	FAR1 family protein