PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021688914.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

NF-YC

Protein Properties

Length: 258aa MW: 28742.3 Da PI: 5.8232

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021688914.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	177.4	1.4e-55	79	182	1	101
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdfl 92 ql++fw++q ie+++dfknh+lPlarikki+kadedv+misaeaPv++++ace+fileltlrsw+h+eenkrrtl+k+diaaa+trt+ifdfl XP_021688914.1 79 QLQTFWTNQyqeIEQTADFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTEIFDFL 173 89****99999****************************************************************************** PP NF-YC 93 vdivprdel 101 vdivpr++l XP_021688914.1 174 VDIVPREDL 182 ****987 PP

Sequence ? help Back to Top
Protein Sequence Length: 258 aa Download sequence
MDQRGHGQHS AAGEVGSTAP VPYGISSYQP NQMMGPSATG SLQSAAQPSG VTASQAQLAQ 60 HQLAYQHIHQ QQQEQLQQQL QTFWTNQYQE IEQTADFKNH SLPLARIKKI MKADEDVRMI 120 SAEAPVIFAR ACEMFILELT LRSWNHTEEN KRRTLQKNDI AAAITRTEIF DFLVDIVPRE 180 DLKDEVLASV PRGSLPVGGP AEAIPYYYMS PQFAPQVAAP GMNVGQPLVD QNLYGQHTRP 240 YVAQPIWPQQ QQQPPADS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	152	158	RRTLQKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08970.3	1e-78	NF-YC family protein