PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021688844.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Protein Properties

Length: 478aa MW: 53287.1 Da PI: 8.987

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021688844.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	56.1	6.8e-18	32	122	1	99
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 ffkv++++ + l lp kfa + + + +k++ led+sg +W+vkl + ++ l +GW F+ ++gL++gDfv+F+++ s f vv+ XP_021688844.1 32 FFKVMITKRFS--EVLFLPPKFAPTVS--TLIEKEIPLEDSSGLQWKVKL--TILENSLALHQGWDTFAFDHGLEVGDFVIFHYILGSHF--VVQ 118 78888665444..459*****9885..335679***********..66666799*********************77999..* PP EE-S CS B3 96 vfrk 99 +f+k XP_021688844.1 119 IFDK 122 **98 PP
2	B3	39.2	1.2e-12	408	473	29	98
-..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 29 kkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 k e + + l+d++ r+W v + +++ +l +GW++F++an+++ gD ++F ++++++ ++v++ r XP_021688844.1 408 K--ERRVVLLKDPDMRQWPVLY--HETPKLKLLMSGWEDFCQANNIQPGDECTFGIESETKGIFRVSIAR 473 3..3347999**********..999999999********************988888877777766 PP

Sequence ? help Back to Top
Protein Sequence Length: 478 aa Download sequence
MGSMVEACAE CRKKCLLCHV KRRKSTPLVS SFFKVMITKR FSEVLFLPPK FAPTVSTLIE 60 KEIPLEDSSG LQWKVKLTIL ENSLALHQGW DTFAFDHGLE VGDFVIFHYI LGSHFVVQIF 120 DKTGCEKLDF SGNKNLKRKR AKADRKSTKK CGPCHSTDKG SIGRQGSNSS AFFDSNVEIS 180 QGQCEINDAI NIKMAICGTS NDENGVARPQ AVSKAEFFEE PFSIINREVG DKEAEYRTAI 240 CDLSSLEMLT YNLDIDRNNK ILVGAKKSSH NADPSLNSKN EVGSDCKGSL NSVPLLASKS 300 PPKPKKNLGS DSMWSNGIHR RCQTDERTEK VQSRKKPEVI KMEQDDPFFI LPKGSNDKVD 360 GVMKLQAANT RILPSAGSVS CLIAANKRPF LELPAALPSS SKKRRTIKER RVVLLKDPDM 420 RQWPVLYHET PKLKLLMSGW EDFCQANNIQ PGDECTFGIE SETKGIFRVS IARSSQVD

Sequence ? help Back to Top

Protein Sequence Length: 478 aa Download sequence

MGSMVEACAE CRKKCLLCHV KRRKSTPLVS SFFKVMITKR FSEVLFLPPK FAPTVSTLIE  60
KEIPLEDSSG LQWKVKLTIL ENSLALHQGW DTFAFDHGLE VGDFVIFHYI LGSHFVVQIF  120
DKTGCEKLDF SGNKNLKRKR AKADRKSTKK CGPCHSTDKG SIGRQGSNSS AFFDSNVEIS  180
QGQCEINDAI NIKMAICGTS NDENGVARPQ AVSKAEFFEE PFSIINREVG DKEAEYRTAI  240
CDLSSLEMLT YNLDIDRNNK ILVGAKKSSH NADPSLNSKN EVGSDCKGSL NSVPLLASKS  300
PPKPKKNLGS DSMWSNGIHR RCQTDERTEK VQSRKKPEVI KMEQDDPFFI LPKGSNDKVD  360
GVMKLQAANT RILPSAGSVS CLIAANKRPF LELPAALPSS SKKRRTIKER RVVLLKDPDM  420
RQWPVLYHET PKLKLLMSGW EDFCQANNIQ PGDECTFGIE SETKGIFRVS IARSSQVD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18960.1	5e-12	B3 family protein