PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021688502.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

NF-YA

Protein Properties

Length: 331aa MW: 36340.2 Da PI: 9.6991

Description

NF-YA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021688502.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CBFB_NFYA	88.3	1.1e-27	162	219	1	58
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRaklee.ekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 d p++VN+KQy++I++RR++Rak+ e+k +++rkpy+h SRh hA+rRpRg+gGrF XP_021688502.1 162 DGPIFVNPKQYHGIIRRRKTRAKAVLlENKS-TRKRKPYMHLSRHLHAMRRPRGTGGRF 219 57*******************99856666.************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 331 aa Download sequence
MAVKTLYFKE HEGIVHNPIG QLSSVPSVPW WTTYGSQSVY GESCGLVKAS SIEQSSTGGD 60 QLTAMKQASR CTEKGLDKGN TTQFTIFPGD CKTSDEGQKS PQTAISLQTT LPEYRSHIDL 120 GFGQPMICAK YPHMDHCYGV FSTYGPQISG RIMLPMNITT DDGPIFVNPK QYHGIIRRRK 180 TRAKAVLLEN KSTRKRKPYM HLSRHLHAMR RPRGTGGRFL NTKTSKNGIH EIEAKKATGG 240 KIFQPTGSQS SEVLQSDSGT LNSSKEANGG GSNLSGSEVT SMYTRRDLDH CSINHLTSQV 300 QSFSIMMDSG HSIVMPTKWV AAADNCCNLK V

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	177	196	RRRKTRAKAVLLENKSTRKR
2	177	197	RRRKTRAKAVLLENKSTRKRK
3	178	197	RRRKTRAKAVLLENKSTRKR
4	178	198	RRRKTRAKAVLLENKSTRKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06510.2	8e-69	NF-YA family protein