PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021687930.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | GRAS | ||||||||
Protein Properties | Length: 441aa MW: 47813 Da PI: 6.0954 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 381.7 | 8.9e-117 | 79 | 438 | 3 | 374 |
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 lLl+cAe+v+ ++l a+ lL ++sel+sp g++ +R+ ayf+ AL+ar+++s+ ++y+ l++++ + ++s++ ++a++ ++ +sP++kfsh+t XP_021687930.1 79 GLLLQCAECVAMDNLDDASDLLPEISELSSPFGSSPERVGAYFAHALHARVVSSCLGTYSPLTSKSLTLTQSQKIFNAFQSYNSISPLIKFSHFT 173 58********************************************************************************************* PP GRAS 98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlele 192 aNq I +a++ge+rvH+iD+di+qGlQWp L++ LasR+++ s+RiTg+gs s+e le+tg+rLa+fA++lg+pfef+++ k + +++ XP_021687930.1 174 ANQSIFQALDGEDRVHVIDLDIMQGLQWPGLFHILASRTKKVRSMRITGFGS----SSELLESTGKRLADFANSLGLPFEFHPVEGKIGNVTDVS 264 ****************************************************....9**************************7666666679** PP GRAS 193 eLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvEr 287 +L v+p+Ea++V++++ h l+d ++s +L+l+ l+Pk+++ veq+++h ++sFl rf+eal+yysalfd+l +l+++s er++vE+ XP_021687930.1 265 QLGVRPREAVVVHWMH--HCLYDITGSDLG----TLRLLTLLRPKLITTVEQDLSH-GGSFLGRFVEALHYYSALFDALGDGLGADSVERHTVEQ 352 **************99..777777777777....9*********************.789*********************************** PP GRAS 288 ellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 +l+g ei+n+va g +r+ + + +e+W + l+++GF+pv+l+ + a+qa+lll +++++gy++ ee+g+l lgWkd +L+++SaWr XP_021687930.1 353 QLFGSEIRNIVAVGGPKRTGEVK-VERWGDELRRVGFQPVSLGGNPAAQASLLLGMFPWKGYTLVEENGCLKLGWKDLSLLTASAWR 438 *****************998887.9*************************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 441 aa Download sequence |
MLQSLVPQSP INSSSKPNNS TSSMKTKRVD KELAGGDASG GADDPSAKRP NFSTEATVSG 60 DKTTGEEDST ESTGLRLLGL LLQCAECVAM DNLDDASDLL PEISELSSPF GSSPERVGAY 120 FAHALHARVV SSCLGTYSPL TSKSLTLTQS QKIFNAFQSY NSISPLIKFS HFTANQSIFQ 180 ALDGEDRVHV IDLDIMQGLQ WPGLFHILAS RTKKVRSMRI TGFGSSSELL ESTGKRLADF 240 ANSLGLPFEF HPVEGKIGNV TDVSQLGVRP REAVVVHWMH HCLYDITGSD LGTLRLLTLL 300 RPKLITTVEQ DLSHGGSFLG RFVEALHYYS ALFDALGDGL GADSVERHTV EQQLFGSEIR 360 NIVAVGGPKR TGEVKVERWG DELRRVGFQP VSLGGNPAAQ ASLLLGMFPW KGYTLVEENG 420 CLKLGWKDLS LLTASAWRPS E |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G41920.1 | 1e-179 | GRAS family protein |