PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021687847.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Trihelix

Protein Properties

Length: 996aa MW: 111278 Da PI: 7.0089

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021687847.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	30.9	6.9e-10	228	296	13	82
trihelix 13 arremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyf 82 ++ e+ ++ rgk ++ + +ev+++++++g++r +k+ kw+n+ ++++k+ e+e++ ++++ + +yf XP_021687847.1 228 ITGEVTVQSTRGKTRADKDAEVAEFLQRHGVNRDAKTAGTKWDNMLGEFRKVYEWERGS-EGDQMRKSYF 296 6677788889999********************************************85.7777677777 PP

Sequence ? help Back to Top
Protein Sequence Length: 996 aa Download sequence
MGDNKGETAK KQTQQSQQQQ LSPSPKDPLE ESPETRPHHH QQPPSVVVTG APFISTPLYV 60 PIGATSSPFD QQFDTVTVTP KRPRYATAQW KILPSPSQQQ QTQTPIVTSE SSPSGPSPST 120 NPTPIVASTT TTNPQTQQLH ATAASSSDTA SSPPHSPIPS LLAASGHETS KTEGQQLHHQ 180 LRKGKYVSPV WKPNEMLWLA RAWRVQYQGG YDASGTSSRT EHLETGQITG EVTVQSTRGK 240 TRADKDAEVA EFLQRHGVNR DAKTAGTKWD NMLGEFRKVY EWERGSEGDQ MRKSYFRISP 300 YERKQRKLPT SFDEEVFEEL SQFMGSRMRT SSRGPPAIAS DDDGSRTALT GARALPPPPP 360 FKEDDYSVPA RTKQVMTSGA EAYFHGSRGS MLGFETSMDV VAGTSSSSKE RRRIGKIRMT 420 WEESVSLWAE EGENRGRVRV QGSSFLNADE LTFFDDSMVA CTMEAFEDGP LKGFSVDRFV 480 SGQQVKVFGR RKSCPSASAS SGFVERAQLP SIEPSIRSIP PGEFQDPTEY YVGCLRVPPT 540 ALPNLFELSW YLQEPPPEEL RFPLRRDVYR DLPPGKERFF ATTSELLDCR GIAFDILSSV 600 IRTNPCISGG NASSRDSFIG IWDDCINRVV SKFCSVEVVI VRKDSSSSVD TLQDQWPNVT 660 GFVRNFCLWR GEETDQLREG LIDPSSSIVE KLLWTYMDIP YILGYYAVGY LVTFCALYRS 720 QDRIIRTDLC TLDLSSPVER LKALVPCYRI AGLLPLLAER CFNNVNNGGT LKQLTFSDFE 780 RVDAGDGGII EMTPNTVTRF FPNRRKWAAV KEIYDFLDQR IPHAEFIYLS REKDLALVFK 840 PRGVKFKPTN CEQLVEALKY VTKALVALHD LSFMHRDLSW DKVMRRGDGE NEWFVCGFDE 900 AVVAPQLNPH ETVEARGRYA PEMGRGLHGV KVDVWGVGHL VKTCGLCPSG VPKMLKELQN 960 RCLDQNPEQR PTAADCYHHL LQVQSSLRSS SSGGTY

Sequence ? help Back to Top

Protein Sequence Length: 996 aa Download sequence

MGDNKGETAK KQTQQSQQQQ LSPSPKDPLE ESPETRPHHH QQPPSVVVTG APFISTPLYV  60
PIGATSSPFD QQFDTVTVTP KRPRYATAQW KILPSPSQQQ QTQTPIVTSE SSPSGPSPST  120
NPTPIVASTT TTNPQTQQLH ATAASSSDTA SSPPHSPIPS LLAASGHETS KTEGQQLHHQ  180
LRKGKYVSPV WKPNEMLWLA RAWRVQYQGG YDASGTSSRT EHLETGQITG EVTVQSTRGK  240
TRADKDAEVA EFLQRHGVNR DAKTAGTKWD NMLGEFRKVY EWERGSEGDQ MRKSYFRISP  300
YERKQRKLPT SFDEEVFEEL SQFMGSRMRT SSRGPPAIAS DDDGSRTALT GARALPPPPP  360
FKEDDYSVPA RTKQVMTSGA EAYFHGSRGS MLGFETSMDV VAGTSSSSKE RRRIGKIRMT  420
WEESVSLWAE EGENRGRVRV QGSSFLNADE LTFFDDSMVA CTMEAFEDGP LKGFSVDRFV  480
SGQQVKVFGR RKSCPSASAS SGFVERAQLP SIEPSIRSIP PGEFQDPTEY YVGCLRVPPT  540
ALPNLFELSW YLQEPPPEEL RFPLRRDVYR DLPPGKERFF ATTSELLDCR GIAFDILSSV  600
IRTNPCISGG NASSRDSFIG IWDDCINRVV SKFCSVEVVI VRKDSSSSVD TLQDQWPNVT  660
GFVRNFCLWR GEETDQLREG LIDPSSSIVE KLLWTYMDIP YILGYYAVGY LVTFCALYRS  720
QDRIIRTDLC TLDLSSPVER LKALVPCYRI AGLLPLLAER CFNNVNNGGT LKQLTFSDFE  780
RVDAGDGGII EMTPNTVTRF FPNRRKWAAV KEIYDFLDQR IPHAEFIYLS REKDLALVFK  840
PRGVKFKPTN CEQLVEALKY VTKALVALHD LSFMHRDLSW DKVMRRGDGE NEWFVCGFDE  900
AVVAPQLNPH ETVEARGRYA PEMGRGLHGV KVDVWGVGHL VKTCGLCPSG VPKMLKELQN  960
RCLDQNPEQR PTAADCYHHL LQVQSSLRSS SSGGTY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	3e-09	Trihelix family protein