PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021687833.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MYB | ||||||||
Protein Properties | Length: 251aa MW: 28334.5 Da PI: 9.9305 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.4 | 2.6e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W++ Ed+ l++++k++G g W+ +r+ g++R++k+c++rw++yl XP_021687833.1 14 RGAWSASEDKVLINYIKLHGEGKWRDLPRRAGLKRCGKSCRLRWLNYL 61 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 49 | 1.4e-15 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ + +E++l+++++k+lG++ W++Ia +++ gRt++++k++w++ XP_021687833.1 67 RGNISVDEEDLIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNSN 111 788999****************.*********.***********976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence |
MGRRPCCAKE GVKRGAWSAS EDKVLINYIK LHGEGKWRDL PRRAGLKRCG KSCRLRWLNY 60 LRPDIKRGNI SVDEEDLIIR LHKLLGNRWS LIAGRLPGRT DNEIKNYWNS NLRKRVKGEK 120 GSRCSSKLRF DNLSKKKNSP PPPPPGAVQT KPVTCSKVVI IPQALEKEQV IQKKAESKRT 180 PSCSALQQED SSLDLDFDID DFLLLEAPNS ELDQAKLNIN GNALGPGDYG LNNLSSCWPE 240 FPVSTVDSFY Y |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13540.1 | 8e-61 | MYB family protein |