PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021687679.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 504aa MW: 56095.2 Da PI: 8.8559

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021687679.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	34.9	3.6e-11	14	52	9	48
HHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 9 dellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 de l +av+ + g++Wk+Ia+ ++ R++ qc +rwqk+l XP_021687679.1 14 DETLRNAVAAFKGKSWKKIAEFFP-DRSEVQCLHRWQKVL 52 899*******************.**********986 PP
2	Myb_DNA-binding	56.9	4.8e-18	58	104	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd+++ +v+++G+ W+ Ia+ ++ gR +kqc++rw+++l XP_021687679.1 58 KGPWTQEEDDKITVLVAKYGPTKWSVIAKSLP-GRIGKQCRERWHNHL 104 79****************************.***********97 PP
3	Myb_DNA-binding	57.5	3.2e-18	110	153	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +++WT eE++ l +a++++G++ W+ Ia+ ++ gRt++++k++w++ XP_021687679.1 110 KDAWTLEEELELMNAHRKHGNK-WAEIAKVLP-GRTDNSIKNHWNS 153 679*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 504 aa Download sequence
MSFASIPATS QSADETLRNA VAAFKGKSWK KIAEFFPDRS EVQCLHRWQK VLNPDLVKGP 60 WTQEEDDKIT VLVAKYGPTK WSVIAKSLPG RIGKQCRERW HNHLNPDIKK DAWTLEEELE 120 LMNAHRKHGN KWAEIAKVLP GRTDNSIKNH WNSSLKKKLD FYLATGKLPP VVKNDIVFSS 180 RKHPSVAKNS IQDGSKDTNK PAVTKTSKES DSTARTSSGT TDACKLEEDG KDQLESVALV 240 RDMAASSSVF PNESADSVGV ECKPHSFVAD LSCCDSESLR KCENYRINYE ISEEKVFGSQ 300 LQFETSTYGP LYYEPPLLET CTPIDLNPLV MRQVQHEYSS SPISSPISFF TPPCVKSSHL 360 SAQSPESILR TAAKSYPNTP SIFRKRKTGS QVHLLPAKVG KVGQECVEDR LQRRTENTSE 420 KAGSQDKNLF DSPHPDNSTS LPNGKAFNAS PPYRLKSKRT AVFKSVERQL EFTLDKERCD 480 STKSVNGSAL VSEGCPHATK MGVT

Sequence ? help Back to Top

Protein Sequence Length: 504 aa Download sequence

MSFASIPATS QSADETLRNA VAAFKGKSWK KIAEFFPDRS EVQCLHRWQK VLNPDLVKGP  60
WTQEEDDKIT VLVAKYGPTK WSVIAKSLPG RIGKQCRERW HNHLNPDIKK DAWTLEEELE  120
LMNAHRKHGN KWAEIAKVLP GRTDNSIKNH WNSSLKKKLD FYLATGKLPP VVKNDIVFSS  180
RKHPSVAKNS IQDGSKDTNK PAVTKTSKES DSTARTSSGT TDACKLEEDG KDQLESVALV  240
RDMAASSSVF PNESADSVGV ECKPHSFVAD LSCCDSESLR KCENYRINYE ISEEKVFGSQ  300
LQFETSTYGP LYYEPPLLET CTPIDLNPLV MRQVQHEYSS SPISSPISFF TPPCVKSSHL  360
SAQSPESILR TAAKSYPNTP SIFRKRKTGS QVHLLPAKVG KVGQECVEDR LQRRTENTSE  420
KAGSQDKNLF DSPHPDNSTS LPNGKAFNAS PPYRLKSKRT AVFKSVERQL EFTLDKERCD  480
STKSVNGSAL VSEGCPHATK MGVT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02320.2	1e-142	MYB family protein