PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021687678.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MYB | ||||||||
Protein Properties | Length: 557aa MW: 61626.4 Da PI: 8.8133 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.2 | 6.8e-17 | 59 | 105 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEde l +av+ + g++Wk+Ia+ ++ R++ qc +rwqk+l XP_021687678.1 59 KGGWTPEEDETLRNAVAAFKGKSWKKIAEFFP-DRSEVQCLHRWQKVL 105 688*****************************.************986 PP | |||||||
2 | Myb_DNA-binding | 56.7 | 5.5e-18 | 111 | 157 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd+++ +v+++G+ W+ Ia+ ++ gR +kqc++rw+++l XP_021687678.1 111 KGPWTQEEDDKITVLVAKYGPTKWSVIAKSLP-GRIGKQCRERWHNHL 157 79******************************.*************97 PP | |||||||
3 | Myb_DNA-binding | 57.3 | 3.7e-18 | 163 | 206 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +++WT eE++ l +a++++G++ W+ Ia+ ++ gRt++++k++w++ XP_021687678.1 163 KDAWTLEEELELMNAHRKHGNK-WAEIAKVLP-GRTDNSIKNHWNS 206 679*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 557 aa Download sequence |
MGEVKIEECC LENKQLTAAS SSSISEGSGS AILKSPGVSS PATASPTHRR TTGPIRRAKG 60 GWTPEEDETL RNAVAAFKGK SWKKIAEFFP DRSEVQCLHR WQKVLNPDLV KGPWTQEEDD 120 KITVLVAKYG PTKWSVIAKS LPGRIGKQCR ERWHNHLNPD IKKDAWTLEE ELELMNAHRK 180 HGNKWAEIAK VLPGRTDNSI KNHWNSSLKK KLDFYLATGK LPPVVKNDIV FSSRKHPSVA 240 KNSIQDGSKD TNKPAVTKTS KESDSTARTS SGTTDACKLE EDGKDQLESV ALVRDMAASS 300 SVFPNESADS VGVECKPHSF VADLSCCDSE SLRKCENYRI NYEISEEKVF GSQLQFETST 360 YGPLYYEPPL LETCTPIDLN PLVMRQVQHE YSSSPISSPI SFFTPPCVKS SHLSAQSPES 420 ILRTAAKSYP NTPSIFRKRK TGSQVHLLPA KVGKVGQECV EDRLQRRTEN TSEKAGSQDK 480 NLFDSPHPDN STSLPNGKAF NASPPYRLKS KRTAVFKSVE RQLEFTLDKE RCDSTKSVNG 540 SALVSEGCPH ATKMGVT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G02320.2 | 1e-165 | MYB family protein |