PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021687242.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 346aa MW: 38614.7 Da PI: 8.1324

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021687242.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.4	5.9e-17	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+ +++++G+g +W + ++++g++R++k+c++rw++yl XP_021687242.1 14 KGPWSPEEDAKLKAYIEKHGTGgNWIALPQKIGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	38	3.7e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd+++ + G++ W+ Ia+ ++ gRt++++k++w++ XP_021687242.1 69 GGFSEEEDDIICSLYISIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
MGRAPCCDKA NVKKGPWSPE EDAKLKAYIE KHGTGGNWIA LPQKIGLKRC GKSCRLRWLN 60 YLRPNIKHGG FSEEEDDIIC SLYISIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLLGK 120 QRKEQQARRG SGGLKQALKR GNANPIVSDD YNNNQNTYWP GLPLLAPTPF SNQEPRFNDH 180 ASIRKLLIKL GGRFSEDDQL IRNATSPNNQ FPNDISYTQQ LYDQPINNVS SSASVYISND 240 TAVQFAQAQY NMDGAGLQMI HGERNFPMGI EEMACNNQQR LDGLEFLLSE DMLNGRTGTT 300 SGESIVGSLG EISSLMCPPM APHCEGIQQG LLQECPLEEL RYPGPL

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

MGRAPCCDKA NVKKGPWSPE EDAKLKAYIE KHGTGGNWIA LPQKIGLKRC GKSCRLRWLN  60
YLRPNIKHGG FSEEEDDIIC SLYISIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLLGK  120
QRKEQQARRG SGGLKQALKR GNANPIVSDD YNNNQNTYWP GLPLLAPTPF SNQEPRFNDH  180
ASIRKLLIKL GGRFSEDDQL IRNATSPNNQ FPNDISYTQQ LYDQPINNVS SSASVYISND  240
TAVQFAQAQY NMDGAGLQMI HGERNFPMGI EEMACNNQQR LDGLEFLLSE DMLNGRTGTT  300
SGESIVGSLG EISSLMCPPM APHCEGIQQG LLQECPLEEL RYPGPL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49690.1	1e-77	MYB family protein