PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021687227.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

GRF

Protein Properties

Length: 595aa MW: 64633.5 Da PI: 6.7324

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021687227.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	77.1	1.7e-24	225	269	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCsr++++++k+CErH++rgr+rsrk++e XP_021687227.1 225 DPEPGRCRRTDGKKWRCSRDAVADQKYCERHMNRGRHRSRKPVEG 269 79****************************************985 PP
2	QLQ	62.7	9.9e-22	155	191	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 ++FT++Q+++L++Q+l+yKy+ an+P+P++Ll +i+k XP_021687227.1 155 GPFTPSQWMELEHQALIYKYITANVPIPSNLLIPIRK 191 59*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 595 aa Download sequence
MDFGVVGLEG LVGSDTSSSG LASLATSDPE TKQKWYGSGF LKQERSVTIE DDWRSSKLSK 60 TESMLLPQRN TLLKSNTSNA STTTTTTLFT DGQQQQQMLS FSCPKSEAIS AERIPQNATL 120 PYFHLTSSAY NRNTGYNYGS FNSANMHGVL TEARGPFTPS QWMELEHQAL IYKYITANVP 180 IPSNLLIPIR KALDSAGFSS FSGGLLRPNA LSWGTFHLGF SSNTDPEPGR CRRTDGKKWR 240 CSRDAVADQK YCERHMNRGR HRSRKPVEGQ SGHSAAAATS TMTAKSMPTA SAAAAAAKTL 300 XQPDSSFNLS AATPLSRMFL DKEKLGERDR LQDSPGLSML SSNIDLKSKE NPFFVSKESS 360 QIEFGLVNSD SLLNPSQNSS SLISCRNFGL SQDLTDQETV SQHSVRQFMD DWPKCQSDQS 420 AVSWPQLDVQ SDRTQLSISI PMAHTDYMSS TSSPNNEKVT LSPLRLCRDL DPVQMGLGVG 480 SVLNEQNQRQ ANWIPISWET SMGGPLGEVL HNTNSSASEC KSSSALNLMT EGWDSSPQLG 540 SSPTGVLQKT TFASLSNSSA GSSPRAENNK TNEGASLCND LLGSTLVHSS SLPEL

Sequence ? help Back to Top

Protein Sequence Length: 595 aa Download sequence

MDFGVVGLEG LVGSDTSSSG LASLATSDPE TKQKWYGSGF LKQERSVTIE DDWRSSKLSK  60
TESMLLPQRN TLLKSNTSNA STTTTTTLFT DGQQQQQMLS FSCPKSEAIS AERIPQNATL  120
PYFHLTSSAY NRNTGYNYGS FNSANMHGVL TEARGPFTPS QWMELEHQAL IYKYITANVP  180
IPSNLLIPIR KALDSAGFSS FSGGLLRPNA LSWGTFHLGF SSNTDPEPGR CRRTDGKKWR  240
CSRDAVADQK YCERHMNRGR HRSRKPVEGQ SGHSAAAATS TMTAKSMPTA SAAAAAAKTL  300
XQPDSSFNLS AATPLSRMFL DKEKLGERDR LQDSPGLSML SSNIDLKSKE NPFFVSKESS  360
QIEFGLVNSD SLLNPSQNSS SLISCRNFGL SQDLTDQETV SQHSVRQFMD DWPKCQSDQS  420
AVSWPQLDVQ SDRTQLSISI PMAHTDYMSS TSSPNNEKVT LSPLRLCRDL DPVQMGLGVG  480
SVLNEQNQRQ ANWIPISWET SMGGPLGEVL HNTNSSASEC KSSSALNLMT EGWDSSPQLG  540
SSPTGVLQKT TFASLSNSSA GSSPRAENNK TNEGASLCND LLGSTLVHSS SLPEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22840.1	3e-94	GRF family protein