PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_021687001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
|
||||||||
Family | MYB_related | ||||||||
Protein Properties | Length: 268aa MW: 29400.5 Da PI: 10.6137 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 46.1 | 1.1e-14 | 90 | 135 | 2 | 47 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++WT+eE++ ++ + ++lG+g+W+ I++ + ++Rt+ q+ s+ qk+ XP_021687001.1 90 KPWTEEEHQTFLAGLEKLGKGDWRGISKNFVTTRTPTQVASHAQKF 135 58******************************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 268 aa Download sequence |
MVKEATRKCS HCGQNGHNSR TCNGKVGVKL FGVRILEKQE RPMKKSASLG NLDSLVNNST 60 VHHHVDDGSF SDGYVSSKRG KAIQERKRGK PWTEEEHQTF LAGLEKLGKG DWRGISKNFV 120 TTRTPTQVAS HAQKFFLRKA STDKKKRRSS LFDMKLKESQ GYPSNGQSFV GVKTMPTSPL 180 VQIMKYNYAR LGYPYTLKSP GSFASCALLT NHPSGIPTPR SFPVSFSQEG PSTENVDPPE 240 LDLKIGPPPQ SPKAASLSPR ASGPISVI |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 144 | 148 | KKKRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G61620.1 | 2e-69 | MYB_related family protein |