PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021686740.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Trihelix

Protein Properties

Length: 609aa MW: 67382.1 Da PI: 6.8766

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021686740.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	95.6	4.5e-30	62	145	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rW++qe+laL+++r++m+ +r+++lk+plWeevs+k++e g++rs+k+Ckek+en+ k++k++keg+ ++++++ t+++fdql+ XP_021686740.1 62 RWPRQETLALLKIRSDMDAVFRDSSLKGPLWEEVSRKLAELGYHRSAKKCKEKFENVYKYHKRTKEGRTGKSEGK--TYRFFDQLQ 145 8******************************************************************975544..6****98 PP
2	trihelix	104.5	7.6e-33	431	515	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rW+k ev+aLi++r++++++++++ k+plWee+s+ m++ g++rs+k+Ckekwen+nk++kk+ke++kkr se+s+tcpyf+ql+ XP_021686740.1 431 RWPKVEVQALINLRTNLDTKYQENGPKGPLWEEISAGMQKLGYNRSAKRCKEKWENINKYFKKVKESSKKR-SEDSKTCPYFHQLD 515 8*******************************************************************8.89999*****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 609 aa Download sequence
MQGDSNTVPA TSGVVDVATA TMVHEDGEVG GGGGGAPNSS GEEDKSIIRV DEGDRMSYGA 60 NRWPRQETLA LLKIRSDMDA VFRDSSLKGP LWEEVSRKLA ELGYHRSAKK CKEKFENVYK 120 YHKRTKEGRT GKSEGKTYRF FDQLQALENH HHHQSQLATP ARPPSLPKLQ PPITTTATLP 180 WSNNLPNVSH AAVPSTTNTA NIIASHQNNN VAPSADPAIN AMPLSSSQPL NPSQNIFPSF 240 QNLTSHLFSS STSSSTASDE GYQTTRKRKR SKWKDFLERL TKDVMKKQEE LQRKFLETVE 300 KREHERMACE EAWRMQEMAR INREHEILIQ ERTTAAAKDA AVIAFLQKIS GQQNSIQTVD 360 IPPPPPPPVV AAAPASAPAP PQSPGPALAP AAAPPQPRPA APPPSLPVVM NLDVSKKDNG 420 QNNAVVSSSS RWPKVEVQAL INLRTNLDTK YQENGPKGPL WEEISAGMQK LGYNRSAKRC 480 KEKWENINKY FKKVKESSKK RSEDSKTCPY FHQLDVLYKE KSKTNESSAN NGDHASVHPI 540 TTMEPLMVRP EQQWPLQHEN QSEKLMDHDD DIEEDDDNDG ETEEEDEGGG RGCFEVVASK 600 PAASVGNGE

Sequence ? help Back to Top

Protein Sequence Length: 609 aa Download sequence

MQGDSNTVPA TSGVVDVATA TMVHEDGEVG GGGGGAPNSS GEEDKSIIRV DEGDRMSYGA  60
NRWPRQETLA LLKIRSDMDA VFRDSSLKGP LWEEVSRKLA ELGYHRSAKK CKEKFENVYK  120
YHKRTKEGRT GKSEGKTYRF FDQLQALENH HHHQSQLATP ARPPSLPKLQ PPITTTATLP  180
WSNNLPNVSH AAVPSTTNTA NIIASHQNNN VAPSADPAIN AMPLSSSQPL NPSQNIFPSF  240
QNLTSHLFSS STSSSTASDE GYQTTRKRKR SKWKDFLERL TKDVMKKQEE LQRKFLETVE  300
KREHERMACE EAWRMQEMAR INREHEILIQ ERTTAAAKDA AVIAFLQKIS GQQNSIQTVD  360
IPPPPPPPVV AAAPASAPAP PQSPGPALAP AAAPPQPRPA APPPSLPVVM NLDVSKKDNG  420
QNNAVVSSSS RWPKVEVQAL INLRTNLDTK YQENGPKGPL WEEISAGMQK LGYNRSAKRC  480
KEKWENINKY FKKVKESSKK RSEDSKTCPY FHQLDVLYKE KSKTNESSAN NGDHASVHPI  540
TTMEPLMVRP EQQWPLQHEN QSEKLMDHDD DIEEDDDNDG ETEEEDEGGG RGCFEVVASK  600
PAASVGNGE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76890.2	1e-120	Trihelix family protein