PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021686006.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MYB
Protein Properties Length: 313aa    MW: 35117.2 Da    PI: 8.4732
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021686006.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding574.4e-183178148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT+eEdell ++vk+ G g+W+t +++ g+ R++k+c++rw +yl
   XP_021686006.1 31 RGPWTPEEDELLSNYVKKEGAGRWRTLPKRAGLLRCGKSCRLRWMNYL 78
                     89******************************99************97 PP
2Myb_DNA-binding48.32.3e-1584129148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rgr  ++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++l
   XP_021686006.1  84 RGRIAPDEEDLILRLHRLLGNR-WSLIAGRIP-GRTDNEIKNYWNTHL 129
                      678889****************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MRNPSSSSSP IPRKTTTTAT TPCCSKVGIK RGPWTPEEDE LLSNYVKKEG AGRWRTLPKR  60
AGLLRCGKSC RLRWMNYLRP SVKRGRIAPD EEDLILRLHR LLGNRWSLIA GRIPGRTDNE  120
IKNYWNTHLS KKLISQGIDP RTHKPLNPNP NSSQFPQGQN QNSGPTSVDL EETGRTYRVI  180
ATKVSQTFNM TNLDHYQNPM VVADGNDNRP NCDALVMGLQ SDQGQSNAEY NYIGNGNEDT  240
FSSFLDSLIN ENENLFLLNQ QQQPQQQQQH FNMVPPSLQH IVSSAQTFNH TAIWEADVAS  300
SMAALGDEDA ALT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13540.16e-80MYB family protein