PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021685984.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 422aa MW: 46997.7 Da PI: 8.4307

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021685984.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18.7	4.9e-06	56	78	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C++C++ F r nL+ H r+H XP_021685984.1 56 YVCEICNQGFQRDQNLQMHRRRH 78 9*********************9 PP
2	zf-C2H2	16.1	3.1e-05	133	155	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k + +s++k H++t+ XP_021685984.1 133 WVCEKCSKGYAVQSDYKAHLKTC 155 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 422 aa Download sequence
MLDNTTSSVP SPSSDPFPAL DNGVSNKRKR KPAGTPDPDA EVVSLSPRTL LESDRYVCEI 60 CNQGFQRDQN LQMHRRRHKV PWKLLKRETQ EVKKRVYVCP EPSCLHHDPC HALGDLVGIK 120 KHFRRKHSNH KQWVCEKCSK GYAVQSDYKA HLKTCGTRGH SCDCGRVFSR VESFIEHQDA 180 CTVRRPQPEL QALQPACSSR TASSTSPSSD GNFSIAPVPR LPIPKPSEPV FLYSSSDRND 240 ASTSSRQEHN LELQLLPSST TRLSQNPDES YPTNLKLSIG SSSRGEKNES NQTSLDTIRE 300 KSGGDPTLEA AKLKEFANEQ LRLAMAEKAY AEEARQQAKR QLDMAELEFA NAKRIRQQAQ 360 AELEKAQVLR EQATKKISST IMQITCQACK QQFQAPAVAA PADETSLAMS YMSSATTEGE 420 GE

Sequence ? help Back to Top

Protein Sequence Length: 422 aa Download sequence

MLDNTTSSVP SPSSDPFPAL DNGVSNKRKR KPAGTPDPDA EVVSLSPRTL LESDRYVCEI  60
CNQGFQRDQN LQMHRRRHKV PWKLLKRETQ EVKKRVYVCP EPSCLHHDPC HALGDLVGIK  120
KHFRRKHSNH KQWVCEKCSK GYAVQSDYKA HLKTCGTRGH SCDCGRVFSR VESFIEHQDA  180
CTVRRPQPEL QALQPACSSR TASSTSPSSD GNFSIAPVPR LPIPKPSEPV FLYSSSDRND  240
ASTSSRQEHN LELQLLPSST TRLSQNPDES YPTNLKLSIG SSSRGEKNES NQTSLDTIRE  300
KSGGDPTLEA AKLKEFANEQ LRLAMAEKAY AEEARQQAKR QLDMAELEFA NAKRIRQQAQ  360
AELEKAQVLR EQATKKISST IMQITCQACK QQFQAPAVAA PADETSLAMS YMSSATTEGE  420
GE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68130.1	1e-157	C2H2 family protein